SMTL ID : 4rfe.4 (3 other biounits)

Crystal structure of ADCC-potent ANTI-HIV-1 Rhesus macaque antibody JR4 Fab

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.91 Å

Oligo State

hetero-1-1-mer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 1 residues within 4Å: Chain A: S.59 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.59 Water bridges: A:T.60

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: R.33, Y.54, S.56 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.56 Water bridges: A:R.33, A:Y.54 Salt bridges: A:R.33

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 2 residues within 4Å: Chain B: N.160, T.161 Ligand excluded by PLIP CL.4: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gohain, N. et al., Cocrystal Structures of Antibody N60-i3 and Antibody JR4 in Complex with gp120 Define More Cluster A Epitopes Involved in Effective Antibody-Dependent Effector Function against HIV-1. J.Virol. (2015)

Release Date

2015-07-15

Peptides

Fab heavy chain of ADCC-potent anti-HIV-1 antibody JR4: A
Fab light chain of ADCC-potent anti-HIV-1 antibody JR4: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

Fab heavy chain of ADCC-potent anti-HIV-1 antibody JR4

Fab light chain of ADCC-potent anti-HIV-1 antibody JR4

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