SMTL ID : 4rg0.1

Crystal structure of BTK kinase domain complexed with 2-[8-fluoro-2-[2-(hydroxymethyl)-3-[1-methyl-5-[[5-(4-methylpiperazin-1-yl)-2-pyridyl]amino]-6-oxo-3-pyridyl]phenyl]-1-oxo-3,4-dihydroisoquinolin-6-yl]-2-methyl-propanenitrile

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x 3P0: 2-{8-fluoro-2-[2-(hydroxymethyl)-3-(1-methyl-5-{[5-(4-methylpiperazin-1-yl)pyridin-2-yl]amino}-6-oxo-1,6-dihydropyridin-3-yl)phenyl]-1-oxo-1,2,3,4-tetrahydroisoquinolin-6-yl}-2-methylpropanenitrile(Non-covalent)

3P0.1: 23 residues within 4Å: Chain A: L.32, G.33, T.34, G.35, Q.36, F.37, V.40, A.52, K.54, T.98, E.99, Y.100, M.101, A.102, G.104, H.143, D.145, N.150, L.152, S.162, D.163, V.170, Y.175 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.32, A:Q.36, A:V.40, A:V.40, A:V.40, A:D.163, A:V.170 Hydrogen bonds: A:K.54, A:M.101, A:M.101, A:S.162, A:S.162 Water bridges: A:G.35, A:L.166

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lou, Y. et al., Finding the perfect spot for fluorine: Improving potency up to 40-fold during a rational fluorine scan of a Bruton's Tyrosine Kinase (BTK) inhibitor scaffold. Bioorg.Med.Chem.Lett. (2015)

Release Date

2014-12-24

Peptides

Tyrosine-protein kinase BTK: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tyrosine-protein kinase BTK

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