SMTL ID : 6ep9.1

Crystal structure of BTK kinase domain complexed with N-[2-methyl-3-[4-methyl-6-[4-(4-methylpiperazine-1-carbonyl)anilino]-5-oxo-pyrazin-2-yl]phenyl]-4-(1-piperidyl)benzamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.01 Å

Oligo State

monomer

Ligands

1 x BNB: N-[2-methyl-3-[4-methyl-6-[4-(4-methylpiperazine-1-carbonyl)anilino]-5-oxo-pyrazin-2-yl]phenyl]-4-(1-piperidyl)benzamide(Non-covalent)

BNB.1: 24 residues within 4Å: Chain A: L.32, G.33, T.34, G.35, Q.36, F.37, V.40, A.52, K.54, T.98, E.99, Y.100, M.101, A.102, N.103, G.104, D.145, N.150, L.152, D.163, L.166, S.167, V.170, Y.175 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Q.36, A:F.37, A:V.40, A:V.40, A:V.40, A:D.163, A:L.166 Hydrogen bonds: A:M.101, A:M.101 Water bridges: A:G.35 Salt bridges: A:E.112

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nittinger, E. et al., Water molecules in protein-ligand interfaces. Evaluation of software tools and SAR comparison. J.Comput.Aided Mol.Des. (2019)

Release Date

2018-08-22

Peptides

Tyrosine-protein kinase BTK: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tyrosine-protein kinase BTK

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