SMTL ID : 4rgg.1 (1 other biounit)

Structure of the lactococcal phage 1358 receptor binding protein in complex with GlcNAc-1P

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

homo-trimer

Ligands

3 x GN1: 2-acetamido-2-deoxy-1-O-phosphono-alpha-D-glucopyranose(Non-covalent)

GN1.1: 8 residues within 4Å: Chain A: R.237, F.240, N.244, N.289, S.291, A.292, N.341, F.343 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:A.292 Hydrogen bonds: A:R.237, A:R.237, A:N.244, A:N.289, A:S.291, A:S.291, A:N.341 Water bridges: A:A.292 GN1.2: 8 residues within 4Å: Chain B: R.237, F.240, N.244, N.289, S.291, A.292, N.341, F.343 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:A.292 Hydrogen bonds: B:R.237, B:R.237, B:N.244, B:N.289, B:S.291, B:S.291, B:N.341 Water bridges: B:A.292 GN1.3: 8 residues within 4Å: Chain C: R.237, F.240, N.244, N.289, S.291, A.292, N.341, F.343 9 PLIP interactions: 9 interactions with chain C Hydrophobic interactions: C:A.292 Hydrogen bonds: C:R.237, C:R.237, C:N.244, C:N.289, C:S.291, C:S.291, C:N.341 Water bridges: C:A.292

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Spinelli, S. et al., Structure of the 1358 lactococcal phage RBP in complex with GlcNAc-1P. To be Published

Release Date

2014-10-15

Peptides

Putative phage structural protein: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

Putative phage structural protein

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