- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.76 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x POP: PYROPHOSPHATE 2-(Non-covalent)
- 4 x 5GP: GUANOSINE-5'-MONOPHOSPHATE(Non-covalent)
5GP.2: 10 residues within 4Å:- Chain A: V.123, D.125, K.153, D.173, F.174, V.175, L.180, D.181
- Ligands: POP.1, MG.4
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:K.153, A:V.175, A:V.175, A:V.175, A:D.181
- pi-Stacking: A:F.174
- pi-Cation interactions: A:F.174
5GP.6: 9 residues within 4Å:- Chain B: V.123, D.125, K.153, D.173, F.174, V.175, L.180, D.181
- Ligands: POP.5
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:K.153, B:V.175, B:V.175, B:V.175, B:D.181
5GP.10: 8 residues within 4Å:- Chain C: V.123, D.173, F.174, V.175, L.180, D.181
- Ligands: POP.9, MG.12
6 PLIP interactions:6 interactions with chain C- Hydrogen bonds: C:V.175, C:V.175, C:V.175, C:D.181
- pi-Stacking: C:F.174
- pi-Cation interactions: C:F.174
5GP.14: 8 residues within 4Å:- Chain D: V.123, D.125, K.153, V.175, L.180, D.181
- Ligands: POP.13, MG.15
5 PLIP interactions:5 interactions with chain D- Hydrogen bonds: D:K.153, D:V.175, D:V.175, D:V.175, D:D.181
- 8 x MG: MAGNESIUM ION(Non-covalent)
MG.3: 2 residues within 4Å:- Chain A: E.121, D.122
4 PLIP interactions:2 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:E.121, A:D.122, H2O.1, H2O.1
MG.4: 3 residues within 4Å:- Chain A: D.181
- Ligands: POP.1, 5GP.2
1 PLIP interactions:1 interactions with chain A- Metal complexes: A:D.181
MG.7: 2 residues within 4Å:- Chain B: E.121, D.122
3 PLIP interactions:2 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:E.121, B:D.122, H2O.2
MG.8: 3 residues within 4Å:- Chain B: D.181, R.187
- Ligands: POP.5
4 PLIP interactions:2 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:D.181, B:D.181, H2O.1, H2O.2
MG.11: 2 residues within 4Å:- Chain C: D.181
- Ligands: POP.9
1 PLIP interactions:1 interactions with chain C- Metal complexes: C:D.181
MG.12: 4 residues within 4Å:- Chain C: E.121, D.122, V.123
- Ligands: 5GP.10
4 PLIP interactions:2 interactions with chain C, 2 Ligand-Water interactions- Metal complexes: C:E.121, C:D.122, H2O.2, H2O.2
MG.15: 3 residues within 4Å:- Chain D: D.181
- Ligands: POP.13, 5GP.14
1 PLIP interactions:1 interactions with chain D- Metal complexes: D:D.181
MG.16: 3 residues within 4Å:- Chain D: E.121, D.122
- Ligands: POP.13
4 PLIP interactions:2 interactions with chain D, 2 Ligand-Water interactions- Metal complexes: D:E.121, D:D.122, H2O.2, H2O.2
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Eng, W.S. et al., First Crystal Structures of Mycobacterium tuberculosis 6-Oxopurine Phosphoribosyltransferase: Complexes with GMP and Pyrophosphate and with Acyclic Nucleoside Phosphonates Whose Prodrugs Have Antituberculosis Activity. J.Med.Chem. (2015)
- Release Date
- 2015-05-20
- Peptides
- Hypoxanthine-guanine phosphoribosyltransferase Hpt: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.76 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x POP: PYROPHOSPHATE 2-(Non-covalent)
- 4 x 5GP: GUANOSINE-5'-MONOPHOSPHATE(Non-covalent)
- 8 x MG: MAGNESIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Eng, W.S. et al., First Crystal Structures of Mycobacterium tuberculosis 6-Oxopurine Phosphoribosyltransferase: Complexes with GMP and Pyrophosphate and with Acyclic Nucleoside Phosphonates Whose Prodrugs Have Antituberculosis Activity. J.Med.Chem. (2015)
- Release Date
- 2015-05-20
- Peptides
- Hypoxanthine-guanine phosphoribosyltransferase Hpt: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D