SMTL ID : 4ria.1 (1 other biounit)

FAN1 Nuclease bound to 5' phosphorylated nicked DNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

monomer

Ligands

1 x DA- DG- DA- DC- DT- DC- DC- DT- DC: DNA (5'-D(P*AP*GP*AP*CP*TP*CP*CP*TP*C)-3')(Non-covalent)

DA-DG-DA-DC-DT-DC-DC-DT-DC.1: 15 residues within 4Å: Chain A: Y.17, R.63, R.67, K.68, Y.79, T.207 Chain D: G.4, A.5, G.6, G.7, A.8, G.9, T.10, C.11, T.12 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:Q.135 Hydrogen bonds: A:A.117, A:Q.135, A:K.136, A:Q.137 Salt bridges: A:K.76, A:K.136, A:R.313

1 x BA: BARIUM ION(Non-covalent)

BA.2: 4 residues within 4Å: Chain A: D.594, E.609, V.610, D.615 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.594, A:D.594, A:E.609, A:V.610

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, R. et al., DNA repair. Mechanism of DNA interstrand cross-link processing by repair nuclease FAN1. Science (2014)

Release Date

2014-12-10

Peptides

Fanconi-associated nuclease 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Fanconi-associated nuclease 1

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