SMTL ID : 4rkh.1

Structure of the MSL2 CXC domain bound with a specific MRE sequence

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-tetramer

Ligands

12 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: C.7, C.9, C.21, C.26 Ligands: ZN.2, ZN.3 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.7, A:C.9, A:C.21, A:C.26 ZN.2: 7 residues within 4Å: Chain A: C.7, C.21, C.35, C.40, C.43 Ligands: ZN.1, ZN.3 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.21, A:C.35, A:C.40, A:C.43 ZN.3: 6 residues within 4Å: Chain A: C.7, C.28, C.35, C.38 Ligands: ZN.1, ZN.2 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.7, A:C.28, A:C.35, A:C.38 ZN.4: 6 residues within 4Å: Chain B: C.7, C.9, C.21, C.26 Ligands: ZN.5, ZN.6 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.7, B:C.9, B:C.21, B:C.26 ZN.5: 7 residues within 4Å: Chain B: C.7, C.21, C.35, C.40, C.43 Ligands: ZN.4, ZN.6 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.21, B:C.35, B:C.40, B:C.43 ZN.6: 6 residues within 4Å: Chain B: C.7, C.28, C.35, C.38 Ligands: ZN.4, ZN.5 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.7, B:C.28, B:C.35, B:C.38 ZN.7: 6 residues within 4Å: Chain C: C.7, C.9, C.21, C.26 Ligands: ZN.8, ZN.9 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.7, C:C.9, C:C.21, C:C.26 ZN.8: 7 residues within 4Å: Chain C: C.7, C.21, C.35, C.40, C.43 Ligands: ZN.7, ZN.9 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.21, C:C.35, C:C.40, C:C.43 ZN.9: 6 residues within 4Å: Chain C: C.7, C.28, C.35, C.38 Ligands: ZN.7, ZN.8 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.7, C:C.28, C:C.35, C:C.38 ZN.10: 6 residues within 4Å: Chain D: C.7, C.9, C.21, C.26 Ligands: ZN.11, ZN.12 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.7, D:C.9, D:C.21, D:C.26 ZN.11: 7 residues within 4Å: Chain D: C.7, C.21, C.35, C.40, C.43 Ligands: ZN.10, ZN.12 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.21, D:C.35, D:C.40, D:C.43 ZN.12: 6 residues within 4Å: Chain D: C.7, C.28, C.35, C.38 Ligands: ZN.10, ZN.11 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.7, D:C.28, D:C.35, D:C.38

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zheng, S. et al., Structural basis of X chromosome DNA recognition by the MSL2 CXC domain during Drosophila dosage compensation. Genes Dev. (2014)

Release Date

2015-01-21

Peptides

E3 ubiquitin-protein ligase msl-2: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

C
E

D
F

E3 ubiquitin-protein ligase msl-2

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