SMTL ID : 4ryd.1 (5 other biounits)

X-ray structure of human furin in complex with the competitive inhibitor para-guanidinomethyl-Phac-R-Tle-R-Amba

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

monomer

Ligands

1 x 2UE- ARG- TBG- ARG- 00S: para-guanidinomethyl-phenylacetyl-Arg-(3-methylvaline)-Arg-(amidomethyl)benzamidine(Non-covalent)

2UE-ARG-TBG-ARG-00S.1: 28 residues within 4Å: Chain A: D.47, D.84, N.85, H.87, L.120, V.124, T.125, D.126, E.129, S.146, W.147, G.148, P.149, E.150, D.151, D.157, G.158, A.160, W.184, A.185, S.186, G.187, N.188, D.199, Y.201, T.202, T.260, S.261 25 PLIP interactions: 25 interactions with chain A Hydrophobic interactions: A:L.120, A:V.124, A:A.185, A:T.260 Hydrogen bonds: A:N.85, A:V.124, A:S.146, A:G.148, A:G.148, A:E.150, A:A.160, A:A.185, A:D.199, A:Y.201, A:Y.201 Water bridges: A:N.85, A:L.120, A:D.126, A:E.129, A:E.129, A:D.157 Salt bridges: A:D.47, A:E.129, A:E.129, A:D.157

3 x FMT: FORMIC ACID(Non-functional Binders)

FMT.2: 4 residues within 4Å: Chain A: N.188, W.221, T.258, G.259 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.258 Water bridges: A:N.188, A:W.221 FMT.3: 5 residues within 4Å: Chain A: F.168, Y.206, W.283, Q.340 Ligands: FMT.4 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.340 FMT.4: 5 residues within 4Å: Chain A: F.168, Y.206, K.342, Y.464 Ligands: FMT.3 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.342

3 x CA: CALCIUM ION(Non-covalent)

CA.5: 6 residues within 4Å: Chain A: D.8, D.55, V.98, N.101, V.103, G.105 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.8, A:D.55, A:V.98, A:V.103, A:G.105 CA.6: 3 residues within 4Å: Chain A: D.151, D.194, E.224 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.194, A:E.224, H2O.3, H2O.3, H2O.6 CA.7: 3 residues within 4Å: Chain A: D.67, D.72, D.74 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.67, A:D.72, H2O.2, H2O.2, H2O.8

1 x NA: SODIUM ION(Non-functional Binders)

NA.8: 4 residues within 4Å: Chain A: T.202, S.204, T.207, S.209 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.202, A:T.207, A:S.209

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hardes, K. et al., Novel Furin Inhibitors with Potent Anti-infectious Activity. Chemmedchem (2015)

Release Date

2015-05-27

Peptides

Furin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Furin

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