SMTL ID : 4tww.1

Structure of SARS-3CL protease complex with a Bromobenzoyl (S,R)-N-decalin type inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.42 Å

Oligo State

homo-dimer

Ligands

2 x 3A7: (2S)-2-({[(3S,4aR,8aS)-2-(4-bromobenzoyl)decahydroisoquinolin-3-yl]methyl}amino)-3-(1H-imidazol-5-yl)propanal(Non-covalent)

3A7.1: 15 residues within 4Å: Chain A: H.41, M.49, F.140, L.141, N.142, G.143, S.144, C.145, H.163, H.164, M.165, E.166, D.187, I.188, Q.189 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:H.41, A:M.165 Hydrogen bonds: A:G.143, A:C.145, A:H.163 3A7.2: 16 residues within 4Å: Chain B: H.41, A.46, M.49, F.140, L.141, N.142, G.143, S.144, C.145, H.163, H.164, E.166, H.172, D.187, I.188, Q.189 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:H.41, B:M.49 Hydrogen bonds: B:G.143, B:C.145, B:H.163

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shimamoto, Y. et al., Fused-ring structure of decahydroisoquinolin as a novel scaffold for SARS 3CL protease inhibitors. Bioorg.Med.Chem. (2015)

Release Date

2015-02-18

Peptides

3C-like proteinase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

3C-like proteinase

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