SMTL ID : 4uak.1

MRCK beta in complex with ADP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.73 Å

Oligo State

homo-dimer

Ligands

2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 17 residues within 4Å: Chain A: I.84, V.92, A.105, K.107, T.139, M.155, D.156, Y.157, Y.158, D.162, D.206, N.207, L.209, D.220, F.372 Ligands: MG.2, MG.3 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:D.156, A:Y.158, A:D.162, A:N.207, A:D.220 Water bridges: A:D.202, A:D.220, A:D.220, A:D.220, A:D.220, A:D.220 Salt bridges: A:K.107, A:K.107 ADP.7: 17 residues within 4Å: Chain B: I.84, V.92, A.105, K.107, T.139, M.155, D.156, Y.157, Y.158, D.162, D.206, N.207, L.209, D.220, F.372 Ligands: MG.8, MG.9 11 PLIP interactions: 11 interactions with chain B Hydrogen bonds: B:D.156, B:Y.158, B:D.162, B:D.162, B:N.207, B:D.220 Water bridges: B:D.202, B:D.202, B:D.220 Salt bridges: B:K.107, B:K.107

4 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 4 residues within 4Å: Chain A: D.202, D.220 Ligands: ADP.1, MG.3 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.220, A:D.220, H2O.6, H2O.7 MG.3: 4 residues within 4Å: Chain A: N.207, D.220 Ligands: ADP.1, MG.2 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.220, H2O.7, H2O.7 MG.8: 4 residues within 4Å: Chain B: D.202, D.220 Ligands: ADP.7, MG.9 4 PLIP interactions: 2 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:D.220, B:D.220, H2O.14, H2O.15 MG.9: 4 residues within 4Å: Chain B: N.207, D.220 Ligands: ADP.7, MG.8 3 PLIP interactions: 1 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:D.220, H2O.15, H2O.15

4 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 5 residues within 4Å: Chain A: G.392, F.393 Chain B: G.392, F.393 Ligands: CL.10 Ligand excluded by PLIP CL.5: 5 residues within 4Å: Chain A: Y.157, Y.158, V.159, D.211, V.212 Ligand excluded by PLIP CL.10: 5 residues within 4Å: Chain A: G.392, F.393 Chain B: G.392, F.393 Ligands: CL.4 Ligand excluded by PLIP CL.11: 5 residues within 4Å: Chain B: Y.157, Y.158, V.159, D.211, V.212 Ligand excluded by PLIP

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.6: 8 residues within 4Å: Chain A: K.107, L.109, M.114, A.121, C.122, F.123, E.126, G.222 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.107, A:K.107, A:T.120, A:C.122 EDO.12: 8 residues within 4Å: Chain B: K.107, L.109, M.114, A.121, C.122, F.123, E.126, G.222 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:K.107, B:K.107, B:T.120, B:C.122

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Unbekandt, M. et al., A novel small-molecule MRCK inhibitor blocks cancer cell invasion. Cell Commun. Signal (2014)

Release Date

2014-10-22

Peptides

Serine/threonine-protein kinase MRCK beta: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Serine/threonine-protein kinase MRCK beta

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