SMTL ID : 4uj5.1 (1 other biounit)

Crystal structure of human Rab11-Rabin8-FIP3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-1-1-mer

Ligands

1 x GNP: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER(Non-covalent)

GNP.1: 25 residues within 4Å: Chain A: S.19, G.20, V.21, G.22, K.23, S.24, N.25, F.35, N.36, L.37, S.39, K.40, S.41, T.42, A.67, G.68, N.123, K.124, D.126, L.127, S.153, A.154, L.155 Chain B: Y.158 Ligands: MG.2 28 PLIP interactions: 26 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:S.19, A:G.20, A:V.21, A:G.22, A:K.23, A:K.23, A:S.24, A:S.24, A:N.25, A:N.25, A:N.36, A:S.39, A:K.40, A:T.42, A:T.66, A:G.68, A:N.123, A:K.124, A:K.124, A:A.154, A:L.155, B:Y.158 Water bridges: A:T.42, A:T.42, B:Y.158 Salt bridges: A:D.126 pi-Stacking: A:F.35, A:F.35

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 4 residues within 4Å: Chain A: S.24, T.42, D.65 Ligands: GNP.1 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:S.24, A:T.42, H2O.1, H2O.1

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 4 residues within 4Å: Chain A: D.91, A.93, K.94, K.124 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.91 Water bridges: A:K.124, A:K.124 Salt bridges: A:K.94, A:K.124

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vetter, M. et al., Structure of Rab11-Fip3-Rabin8 Reveals Simultaneous Binding of Fip3 and Rabin8 Effectors to Rab11. Nat.Struct.Mol.Biol. (2015)

Release Date

2015-08-12

Peptides

RAS-RELATED PROTEIN RAB-11A: A
RAB-3A-INTERACTING PROTEIN: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

RAS-RELATED PROTEIN RAB-11A

RAB-3A-INTERACTING PROTEIN

Related Entries With Identical Sequence