- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.17 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x MN: MANGANESE (II) ION(Non-covalent)
- 4 x PO4: PHOSPHATE ION(Non-functional Binders)
PO4.2: 2 residues within 4Å:- Chain A: R.101, T.102
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:T.102, A:T.102
- Salt bridges: A:R.101
PO4.6: 2 residues within 4Å:- Chain B: R.101, T.102
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:T.102
- Water bridges: B:P.100, B:T.102, B:T.103
- Salt bridges: B:R.101
PO4.9: 2 residues within 4Å:- Chain C: R.101, T.102
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:T.102, C:T.102
- Salt bridges: C:R.101
PO4.12: 2 residues within 4Å:- Chain D: R.101, T.102
4 PLIP interactions:4 interactions with chain D- Hydrogen bonds: D:T.102, D:T.102, D:T.102
- Salt bridges: D:R.101
- 4 x 0V5: (2R)-2-(phosphonooxy)propanoic acid(Non-covalent)
0V5.3: 15 residues within 4Å:- Chain A: C.63, R.94, Y.96, K.99, P.100, E.145, G.165, A.166, R.167, K.188, R.236, H.270, E.304, D.324
- Ligands: MN.1
16 PLIP interactions:16 interactions with chain A- Hydrophobic interactions: A:P.100
- Hydrogen bonds: A:A.166
- Water bridges: A:R.94, A:R.94, A:E.145, A:R.167, A:R.167, A:K.188
- Salt bridges: A:R.94, A:K.99, A:R.167, A:K.188, A:K.188, A:R.236, A:H.270, A:H.270
0V5.5: 15 residues within 4Å:- Chain B: C.63, R.94, Y.96, K.99, P.100, E.145, G.165, A.166, R.167, K.188, R.236, H.270, E.304, D.324
- Ligands: MN.4
15 PLIP interactions:15 interactions with chain B- Hydrophobic interactions: B:P.100
- Hydrogen bonds: B:A.166
- Water bridges: B:R.94, B:R.94, B:E.145, B:R.167, B:R.167
- Salt bridges: B:R.94, B:K.99, B:R.167, B:K.188, B:K.188, B:R.236, B:H.270, B:H.270
0V5.8: 15 residues within 4Å:- Chain C: C.63, R.94, Y.96, K.99, P.100, E.145, G.165, A.166, R.167, K.188, R.236, H.270, E.304, D.324
- Ligands: MN.7
15 PLIP interactions:15 interactions with chain C- Hydrophobic interactions: C:P.100
- Hydrogen bonds: C:A.166
- Water bridges: C:R.94, C:R.94, C:R.167, C:R.167, C:K.188
- Salt bridges: C:R.94, C:K.99, C:R.167, C:K.188, C:K.188, C:R.236, C:H.270, C:H.270
0V5.11: 15 residues within 4Å:- Chain D: C.63, R.94, Y.96, K.99, P.100, E.145, G.165, A.166, R.167, K.188, R.236, H.270, E.304, D.324
- Ligands: MN.10
15 PLIP interactions:15 interactions with chain D- Hydrophobic interactions: D:P.100
- Hydrogen bonds: D:A.166
- Water bridges: D:R.94, D:R.94, D:E.145, D:R.167, D:R.167
- Salt bridges: D:R.94, D:K.99, D:R.167, D:K.188, D:K.188, D:R.236, D:H.270, D:H.270
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Heyes, L.C. et al., Structural Analysis of Substrate-Mimicking Inhibitors in Complex with Neisseria Meningitidis 3-Deoxy-D-Arabino-Heptulosonate 7-Phosphate Synthase - the Importance of Accommodating the Active Site Water. Bioorg.Chem. (2014)
- Release Date
- 2014-10-08
- Peptides
- PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.17 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x MN: MANGANESE (II) ION(Non-covalent)
- 4 x PO4: PHOSPHATE ION(Non-functional Binders)
- 4 x 0V5: (2R)-2-(phosphonooxy)propanoic acid(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Heyes, L.C. et al., Structural Analysis of Substrate-Mimicking Inhibitors in Complex with Neisseria Meningitidis 3-Deoxy-D-Arabino-Heptulosonate 7-Phosphate Synthase - the Importance of Accommodating the Active Site Water. Bioorg.Chem. (2014)
- Release Date
- 2014-10-08
- Peptides
- PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D