SMTL ID : 4uw8.1 (2 other biounits)

Structure of the carboxy-terminal domain of the bacteriophage T5 L- shaped tail fiber with its intra-molecular chaperone domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.52 Å

Oligo State

homo-trimer

Ligands

3 x FLC: CITRATE ANION(Non-covalent)

FLC.1: 10 residues within 4Å: Chain A: Y.55, G.56, R.58, H.68, S.69, A.72, H.74, R.104 Chain B: V.33, H.35 13 PLIP interactions: 10 interactions with chain A, 3 interactions with chain B Hydrogen bonds: A:S.69, A:S.69, A:R.104, A:R.104 Salt bridges: A:R.58, A:H.68, A:H.68, A:H.74, A:R.104, A:R.104, B:H.35, B:H.35 Hydrophobic interactions: B:V.33 FLC.2: 12 residues within 4Å: Chain B: L.51, G.54, Y.55, G.56, R.58, H.68, S.69, H.74, R.104 Chain C: V.33, F.34, H.35 14 PLIP interactions: 2 interactions with chain C, 12 interactions with chain B Hydrophobic interactions: C:V.33, B:L.51 Salt bridges: C:H.35, B:H.68, B:H.74, B:H.74, B:H.74, B:R.104, B:R.104 Hydrogen bonds: B:R.58, B:H.68, B:S.69, B:S.69, B:S.69 FLC.3: 11 residues within 4Å: Chain A: V.33, H.35 Chain C: L.51, Y.55, G.56, R.58, H.68, S.69, A.72, H.74, R.104 11 PLIP interactions: 9 interactions with chain C, 2 interactions with chain A Hydrogen bonds: C:R.58, C:S.69, C:S.69 Salt bridges: C:R.58, C:H.68, C:H.68, C:H.74, C:H.74, C:R.104, A:H.35, A:H.35

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Garcia-Doval, C. et al., Structure of the Receptor-Binding Carboxy-Terminal Domain of the Bacteriophage T5 L-Shaped Tail Fibre with and without Its Intra-Molecular Chaperone. Viruses (2015)

Release Date

2015-08-05

Peptides

L-SHAPED TAIL FIBER PROTEIN: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

L-SHAPED TAIL FIBER PROTEIN

Related Entries With Identical Sequence