SMTL ID : 4uye.1 (1 other biounit)

BROMODOMAIN OF HUMAN BRPF1 WITH N-1,3-dimethyl-2-oxo-6-(piperidin-1- yl)-2,3-dihydro-1H-1,3-benzodiazol-5-yl-2-methoxybenzamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 3 residues within 4Å: Chain A: N.78, L.79, S.82 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.82

1 x 9F9: N-[1,3-dimethyl-2-oxo-6-(piperidin-1-yl)-2,3-dihydro-1H-benzimidazol-5-yl]-2-methoxybenzamide(Non-covalent)

9F9.2: 12 residues within 4Å: Chain A: N.31, I.32, F.33, E.35, V.37, P.38, E.41, V.42, C.84, Y.87, N.88, F.94 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:E.35, A:E.41, A:E.41, A:V.42 Hydrogen bonds: A:N.88 pi-Stacking: A:F.94

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Demont, E.H. et al., 1,3-Dimethyl Benzimidazolones are Potent, Selective Inhibitors of the Brpf1 Bromodomain. Acs Med.Chem.Lett. (2014)

Release Date

2014-09-17

Peptides

PEREGRIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PEREGRIN

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