SMTL ID : 4v1g.1

Crystal structure of a mycobacterial ATP synthase rotor ring

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

homo-9-mer

Ligands

9 x BOG: octyl beta-D-glucopyranoside(Non-covalent)

BOG.1: 6 residues within 4Å: Chain A: Q.50, F.54, F.58 Chain I: I.59, G.62, L.63 3 PLIP interactions: 2 interactions with chain I, 1 interactions with chain A Hydrophobic interactions: I:I.59, I:L.63 Hydrogen bonds: A:Q.50 BOG.2: 2 residues within 4Å: Chain B: F.54, F.58 1 PLIP interactions: 1 interactions with chain B Hydrophobic interactions: B:F.58 BOG.3: 6 residues within 4Å: Chain B: T.55, I.59 Chain C: Q.50, G.51, F.54, F.58 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain C Hydrophobic interactions: B:I.59, C:F.58, C:F.58 BOG.4: 6 residues within 4Å: Chain C: I.59, G.62, L.63 Chain D: Q.50, F.54, F.58 3 PLIP interactions: 2 interactions with chain C, 1 interactions with chain D Hydrophobic interactions: C:I.59, C:L.63 Hydrogen bonds: D:Q.50 BOG.5: 2 residues within 4Å: Chain E: F.54, F.58 1 PLIP interactions: 1 interactions with chain E Hydrophobic interactions: E:F.58 BOG.6: 6 residues within 4Å: Chain E: T.55, I.59 Chain F: Q.50, G.51, F.54, F.58 3 PLIP interactions: 2 interactions with chain F, 1 interactions with chain E Hydrophobic interactions: F:F.58, F:F.58, E:I.59 BOG.7: 6 residues within 4Å: Chain F: I.59, G.62, L.63 Chain G: Q.50, F.54, F.58 3 PLIP interactions: 1 interactions with chain G, 2 interactions with chain F Hydrogen bonds: G:Q.50 Hydrophobic interactions: F:I.59, F:L.63 BOG.8: 2 residues within 4Å: Chain H: F.54, F.58 1 PLIP interactions: 1 interactions with chain H Hydrophobic interactions: H:F.58 BOG.9: 6 residues within 4Å: Chain H: T.55, I.59 Chain I: Q.50, G.51, F.54, F.58 3 PLIP interactions: 1 interactions with chain H, 2 interactions with chain I Hydrophobic interactions: H:I.59, I:F.58, I:F.58

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Preiss, L. et al., Structure of the Mycobacterial ATP Synthase Fo Rotor Ring in Complex with the Anti-Tb Drug Bedaquiline. Sci.Adv. (2015)

Release Date

2015-05-20

Peptides

F0F1 ATP SYNTHASE SUBUNIT C: ABCDEFGHI

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
A

E
B

F
C

G
A

H
B

I
C

Membrane

We predict this structure to be a membrane protein.
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F0F1 ATP SYNTHASE SUBUNIT C

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