SMTL ID : 4v8p.3 (3 other biounits)

T.thermophila 60S ribosomal subunit in complex with initiation factor 6.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.52 Å

Oligo State

hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer

Ligands

209 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)

MG.1: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.2: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.3: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.4: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.5: 2 residues within 4Å: Chain A: A.5, A.6 No protein-ligand interaction detected (PLIP) MG.6: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.7: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.8: 4 residues within 4Å: Chain 1: C.1183, U.1184 Chain B: G.83 Chain X: R.87 No protein-ligand interaction detected (PLIP) MG.9: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.10: 1 residues within 4Å: Chain B: A.101 No protein-ligand interaction detected (PLIP) MG.11: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.12: 3 residues within 4Å: Chain B: G.65, G.108, U.109 No protein-ligand interaction detected (PLIP) MG.13: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.14: 2 residues within 4Å: Chain 1: G.2905 Chain L: S.51 6 PLIP interactions: 6 Ligand-Water interactions Metal complexes: H2O.4, H2O.4, H2O.35, H2O.35, H2O.35, H2O.35 MG.15: 2 residues within 4Å: Chain 1: A.145 Chain N: N.55 No protein-ligand interaction detected (PLIP) MG.16: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.17: 2 residues within 4Å: Chain 1: G.733 Chain P: E.170 No protein-ligand interaction detected (PLIP) MG.18: 3 residues within 4Å: Chain 1: G.2717, U.2718 Chain P: Q.158 No protein-ligand interaction detected (PLIP) MG.19: 1 residues within 4Å: Chain S: Y.132 6 PLIP interactions: 6 Ligand-Water interactions Metal complexes: H2O.5, H2O.5, H2O.5, H2O.23, H2O.23, H2O.23 MG.20: 1 residues within 4Å: Chain 1: G.1492 No protein-ligand interaction detected (PLIP) MG.21: 1 residues within 4Å: Chain 1: A.3332 No protein-ligand interaction detected (PLIP) MG.23: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.24: 1 residues within 4Å: Chain 1: A.55 No protein-ligand interaction detected (PLIP) MG.25: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.26: 2 residues within 4Å: Chain 1: A.46, G.47 No protein-ligand interaction detected (PLIP) MG.27: 2 residues within 4Å: Chain 1: G.47, U.277 No protein-ligand interaction detected (PLIP) MG.28: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.29: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.30: 1 residues within 4Å: Chain 1: U.321 No protein-ligand interaction detected (PLIP) MG.31: 1 residues within 4Å: Chain 1: C.34 No protein-ligand interaction detected (PLIP) MG.32: 1 residues within 4Å: Chain 1: A.38 No protein-ligand interaction detected (PLIP) MG.33: 1 residues within 4Å: Chain 1: U.2602 No protein-ligand interaction detected (PLIP) MG.34: 2 residues within 4Å: Chain 1: C.986, G.2404 No protein-ligand interaction detected (PLIP) MG.35: 1 residues within 4Å: Chain 1: G.728 No protein-ligand interaction detected (PLIP) MG.36: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.37: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.38: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.39: 1 residues within 4Å: Chain 1: A.2751 No protein-ligand interaction detected (PLIP) MG.40: 2 residues within 4Å: Chain 1: G.143, A.145 No protein-ligand interaction detected (PLIP) MG.41: 1 residues within 4Å: Chain 1: A.142 No protein-ligand interaction detected (PLIP) MG.42: 1 residues within 4Å: Chain 1: C.226 No protein-ligand interaction detected (PLIP) MG.43: 2 residues within 4Å: Chain 1: G.272, U.284 No protein-ligand interaction detected (PLIP) MG.44: 1 residues within 4Å: Chain 1: G.273 No protein-ligand interaction detected (PLIP) MG.45: 3 residues within 4Å: Chain 1: G.682, G.683, C.1458 No protein-ligand interaction detected (PLIP) MG.46: 1 residues within 4Å: Chain 1: C.339 No protein-ligand interaction detected (PLIP) MG.47: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.48: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.49: 2 residues within 4Å: Chain 1: C.661 Chain Z: E.23 No protein-ligand interaction detected (PLIP) MG.50: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.51: 1 residues within 4Å: Chain 1: A.2362 No protein-ligand interaction detected (PLIP) MG.52: 1 residues within 4Å: Chain 1: G.533 No protein-ligand interaction detected (PLIP) MG.53: 1 residues within 4Å: Chain 1: G.1392 No protein-ligand interaction detected (PLIP) MG.54: 2 residues within 4Å: Chain 1: G.1432 Chain Z: T.16 No protein-ligand interaction detected (PLIP) MG.55: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.56: 1 residues within 4Å: Chain 1: G.1175 No protein-ligand interaction detected (PLIP) MG.57: 1 residues within 4Å: Chain 1: G.978 No protein-ligand interaction detected (PLIP) MG.58: 1 residues within 4Å: Chain 1: C.1168 No protein-ligand interaction detected (PLIP) MG.59: 4 residues within 4Å: Chain 1: C.672, A.2367, A.2368, G.2370 No protein-ligand interaction detected (PLIP) MG.60: 3 residues within 4Å: Chain 1: U.964, G.1143, A.2805 No protein-ligand interaction detected (PLIP) MG.61: 1 residues within 4Å: Chain 1: G.1460 No protein-ligand interaction detected (PLIP) MG.62: 2 residues within 4Å: Chain 1: G.1470, U.1471 No protein-ligand interaction detected (PLIP) MG.63: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.64: 3 residues within 4Å: Chain 1: U.686, G.824, A.826 No protein-ligand interaction detected (PLIP) MG.65: 2 residues within 4Å: Chain 1: G.748, U.749 No protein-ligand interaction detected (PLIP) MG.66: 3 residues within 4Å: Chain 1: U.764, A.765, G.766 No protein-ligand interaction detected (PLIP) MG.67: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.68: 1 residues within 4Å: Chain 1: A.996 No protein-ligand interaction detected (PLIP) MG.69: 2 residues within 4Å: Chain 1: G.1400 Chain M: L.5 No protein-ligand interaction detected (PLIP) MG.70: 1 residues within 4Å: Chain 1: G.997 No protein-ligand interaction detected (PLIP) MG.71: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.72: 2 residues within 4Å: Chain 1: A.841, A.842 No protein-ligand interaction detected (PLIP) MG.73: 1 residues within 4Å: Chain 1: G.933 No protein-ligand interaction detected (PLIP) MG.74: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.75: 2 residues within 4Å: Chain 1: A.845, C.846 No protein-ligand interaction detected (PLIP) MG.76: 3 residues within 4Å: Chain 1: U.2411, G.2596 Chain C: P.207 No protein-ligand interaction detected (PLIP) MG.77: 1 residues within 4Å: Chain 1: G.1682 No protein-ligand interaction detected (PLIP) MG.78: 1 residues within 4Å: Chain 1: G.1822 No protein-ligand interaction detected (PLIP) MG.79: 2 residues within 4Å: Chain 1: A.1561, G.1562 No protein-ligand interaction detected (PLIP) MG.80: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.81: 1 residues within 4Å: Chain 1: A.1954 No protein-ligand interaction detected (PLIP) MG.82: 2 residues within 4Å: Chain 1: G.2390, A.2970 No protein-ligand interaction detected (PLIP) MG.83: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.84: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.85: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.86: 2 residues within 4Å: Chain 1: G.2130, A.2319 No protein-ligand interaction detected (PLIP) MG.87: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.88: 2 residues within 4Å: Chain 1: U.854, C.1809 No protein-ligand interaction detected (PLIP) MG.89: 1 residues within 4Å: Chain 1: C.2128 No protein-ligand interaction detected (PLIP) MG.90: 2 residues within 4Å: Chain 1: A.895, U.2133 No protein-ligand interaction detected (PLIP) MG.91: 1 residues within 4Å: Chain 1: A.895 No protein-ligand interaction detected (PLIP) MG.92: 1 residues within 4Å: Chain 1: A.1932 No protein-ligand interaction detected (PLIP) MG.93: 2 residues within 4Å: Chain 1: C.1504, U.1895 No protein-ligand interaction detected (PLIP) MG.94: 1 residues within 4Å: Chain 1: U.3055 No protein-ligand interaction detected (PLIP) MG.95: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.96: 3 residues within 4Å: Chain 1: C.2930, G.2931, U.2932 No protein-ligand interaction detected (PLIP) MG.97: 2 residues within 4Å: Chain 1: C.1477, A.1478 No protein-ligand interaction detected (PLIP) MG.98: 1 residues within 4Å: Chain 1: G.1875 No protein-ligand interaction detected (PLIP) MG.99: 2 residues within 4Å: Chain 1: C.1564, C.1577 No protein-ligand interaction detected (PLIP) MG.100: 1 residues within 4Å: Chain 1: G.2954 No protein-ligand interaction detected (PLIP) MG.101: 4 residues within 4Å: Chain 1: U.2181, U.2309, G.2310 Chain C: Q.218 6 PLIP interactions: 6 Ligand-Water interactions Metal complexes: H2O.4, H2O.4, H2O.24, H2O.24, H2O.24, H2O.24 MG.102: 2 residues within 4Å: Chain 1: G.2310 Chain C: Q.218 No protein-ligand interaction detected (PLIP) MG.103: 2 residues within 4Å: Chain 1: A.2944, G.2945 No protein-ligand interaction detected (PLIP) MG.104: 4 residues within 4Å: Chain 1: G.2180, A.2238, A.2239, U.2309 No protein-ligand interaction detected (PLIP) MG.105: 3 residues within 4Å: Chain 1: G.949, A.950, A.2408 No protein-ligand interaction detected (PLIP) MG.106: 2 residues within 4Å: Chain 1: U.981, C.2715 No protein-ligand interaction detected (PLIP) MG.107: 1 residues within 4Å: Chain 1: U.2714 No protein-ligand interaction detected (PLIP) MG.108: 1 residues within 4Å: Chain 1: A.2839 No protein-ligand interaction detected (PLIP) MG.109: 1 residues within 4Å: Chain 1: A.1396 No protein-ligand interaction detected (PLIP) MG.110: 1 residues within 4Å: Chain 1: C.1164 No protein-ligand interaction detected (PLIP) MG.111: 1 residues within 4Å: Chain R: K.13 No protein-ligand interaction detected (PLIP) MG.112: 1 residues within 4Å: Chain 1: G.562 No protein-ligand interaction detected (PLIP) MG.113: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.114: 3 residues within 4Å: Chain 1: A.2808, C.2854, U.2856 No protein-ligand interaction detected (PLIP) MG.115: 2 residues within 4Å: Chain 1: A.2394, G.2862 No protein-ligand interaction detected (PLIP) MG.116: 3 residues within 4Å: Chain 1: A.2392, A.2393, G.2862 No protein-ligand interaction detected (PLIP) MG.117: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.118: 1 residues within 4Å: Chain 1: G.1337 No protein-ligand interaction detected (PLIP) MG.119: 1 residues within 4Å: Chain 1: A.2875 No protein-ligand interaction detected (PLIP) MG.120: 1 residues within 4Å: Chain 1: G.2822 No protein-ligand interaction detected (PLIP) MG.121: 2 residues within 4Å: Chain 1: U.2817, G.2819 No protein-ligand interaction detected (PLIP) MG.122: 1 residues within 4Å: Chain 1: C.1339 No protein-ligand interaction detected (PLIP) MG.123: 3 residues within 4Å: Chain 1: A.1196, A.1197 Chain X: F.211 No protein-ligand interaction detected (PLIP) MG.124: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.125: 3 residues within 4Å: Chain 1: U.1405, G.1448, C.1449 No protein-ligand interaction detected (PLIP) MG.126: 2 residues within 4Å: Chain 1: G.2803, G.2859 No protein-ligand interaction detected (PLIP) MG.127: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.128: 1 residues within 4Å: Chain 1: C.2353 No protein-ligand interaction detected (PLIP) MG.129: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.130: 1 residues within 4Å: Chain 1: U.1864 No protein-ligand interaction detected (PLIP) MG.131: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.132: 2 residues within 4Å: Chain 1: A.1513, C.1861 No protein-ligand interaction detected (PLIP) MG.133: 1 residues within 4Å: Chain 1: A.1863 No protein-ligand interaction detected (PLIP) MG.134: 1 residues within 4Å: Chain 1: A.3061 No protein-ligand interaction detected (PLIP) MG.135: 1 residues within 4Å: Chain 1: C.1868 No protein-ligand interaction detected (PLIP) MG.136: 1 residues within 4Å: Chain 1: G.1517 No protein-ligand interaction detected (PLIP) MG.137: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.138: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.139: 2 residues within 4Å: Chain 1: C.2899, G.2900 No protein-ligand interaction detected (PLIP) MG.140: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.141: 2 residues within 4Å: Chain 1: U.3043, A.3075 No protein-ligand interaction detected (PLIP) MG.142: 2 residues within 4Å: Chain 1: G.2245, G.2246 No protein-ligand interaction detected (PLIP) MG.143: 1 residues within 4Å: Chain 1: C.2328 No protein-ligand interaction detected (PLIP) MG.144: 1 residues within 4Å: Chain 1: G.1922 No protein-ligand interaction detected (PLIP) MG.145: 4 residues within 4Å: Chain 1: A.1920, G.1921, G.1922, G.1923 No protein-ligand interaction detected (PLIP) MG.146: 1 residues within 4Å: Chain 1: U.3073 No protein-ligand interaction detected (PLIP) MG.147: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.148: 3 residues within 4Å: Chain 1: G.1926, U.1927, A.2907 No protein-ligand interaction detected (PLIP) MG.149: 2 residues within 4Å: Chain 1: U.2293, A.2294 No protein-ligand interaction detected (PLIP) MG.150: 3 residues within 4Å: Chain 1: A.2275, A.2294, G.2295 No protein-ligand interaction detected (PLIP) MG.151: 1 residues within 4Å: Chain 1: G.1930 No protein-ligand interaction detected (PLIP) MG.152: 1 residues within 4Å: Chain 1: C.2325 No protein-ligand interaction detected (PLIP) MG.153: 1 residues within 4Å: Chain 1: G.2101 No protein-ligand interaction detected (PLIP) MG.154: 1 residues within 4Å: Chain 1: G.1963 No protein-ligand interaction detected (PLIP) MG.155: 2 residues within 4Å: Chain 1: A.1957, G.1958 No protein-ligand interaction detected (PLIP) MG.156: 3 residues within 4Å: Chain 1: G.2189, C.2190, A.2308 No protein-ligand interaction detected (PLIP) MG.157: 3 residues within 4Å: Chain 1: U.2105, G.2106, G.2109 No protein-ligand interaction detected (PLIP) MG.158: 1 residues within 4Å: Chain 1: U.2261 No protein-ligand interaction detected (PLIP) MG.159: 2 residues within 4Å: Chain 1: A.2209, G.2211 No protein-ligand interaction detected (PLIP) MG.160: 2 residues within 4Å: Chain 1: G.2348, C.2349 No protein-ligand interaction detected (PLIP) MG.161: 1 residues within 4Å: Chain 1: G.949 No protein-ligand interaction detected (PLIP) MG.162: 1 residues within 4Å: Chain 1: A.2736 No protein-ligand interaction detected (PLIP) MG.163: 1 residues within 4Å: Chain 1: G.2703 No protein-ligand interaction detected (PLIP) MG.164: 1 residues within 4Å: Chain 1: G.2902 No protein-ligand interaction detected (PLIP) MG.165: 2 residues within 4Å: Chain 1: G.2889, A.2890 No protein-ligand interaction detected (PLIP) MG.166: 1 residues within 4Å: Chain 1: G.2883 No protein-ligand interaction detected (PLIP) MG.167: 1 residues within 4Å: Chain 1: U.3008 No protein-ligand interaction detected (PLIP) MG.168: 1 residues within 4Å: Chain 1: A.3080 No protein-ligand interaction detected (PLIP) MG.169: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.170: 2 residues within 4Å: Chain 1: U.3093, G.3117 No protein-ligand interaction detected (PLIP) MG.171: 2 residues within 4Å: Chain 1: A.2651 Chain O: A.32 No protein-ligand interaction detected (PLIP) MG.172: 1 residues within 4Å: Chain 1: G.2151 No protein-ligand interaction detected (PLIP) MG.173: 4 residues within 4Å: Chain 1: G.962, A.987, G.988, U.2405 No protein-ligand interaction detected (PLIP) MG.174: 3 residues within 4Å: Chain 1: G.2647, G.2695, C.2744 No protein-ligand interaction detected (PLIP) MG.175: 1 residues within 4Å: Chain 1: A.707 No protein-ligand interaction detected (PLIP) MG.176: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.177: 1 residues within 4Å: Chain 1: U.3124 No protein-ligand interaction detected (PLIP) MG.178: 3 residues within 4Å: Chain 1: U.2999, A.3123 Chain K: R.73 No protein-ligand interaction detected (PLIP) MG.179: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.180: 1 residues within 4Å: Chain 1: U.3261 No protein-ligand interaction detected (PLIP) MG.181: 1 residues within 4Å: Chain 1: G.9 No protein-ligand interaction detected (PLIP) MG.182: 1 residues within 4Å: Chain 1: G.3189 No protein-ligand interaction detected (PLIP) MG.183: 1 residues within 4Å: Chain 1: U.3187 No protein-ligand interaction detected (PLIP) MG.184: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.185: 1 residues within 4Å: Chain 1: G.3337 No protein-ligand interaction detected (PLIP) MG.186: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.187: 2 residues within 4Å: Chain 1: U.1625 Chain b: R.29 No protein-ligand interaction detected (PLIP) MG.188: 2 residues within 4Å: Chain 1: U.1462, A.2397 No protein-ligand interaction detected (PLIP) MG.189: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.190: 1 residues within 4Å: Chain 1: G.2637 No protein-ligand interaction detected (PLIP) MG.191: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.192: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.193: 1 residues within 4Å: Chain 1: U.1525 No protein-ligand interaction detected (PLIP) MG.194: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.195: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.196: 1 residues within 4Å: Chain 1: G.390 No protein-ligand interaction detected (PLIP) MG.197: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.198: 2 residues within 4Å: Chain 1: U.325 Chain i: Q.29 No protein-ligand interaction detected (PLIP) MG.199: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.200: 1 residues within 4Å: Chain 1: G.1418 No protein-ligand interaction detected (PLIP) MG.201: 2 residues within 4Å: Chain 1: A.201, G.202 No protein-ligand interaction detected (PLIP) MG.202: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.203: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.204: 1 residues within 4Å: Chain 1: G.2638 No protein-ligand interaction detected (PLIP) MG.205: 1 residues within 4Å: Chain 1: U.231 No protein-ligand interaction detected (PLIP) MG.206: 2 residues within 4Å: Chain 1: A.2651, A.2693 No protein-ligand interaction detected (PLIP) MG.207: 2 residues within 4Å: Chain 2: T.62 Chain A: U.58 No protein-ligand interaction detected (PLIP) MG.208: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) MG.211: 1 residues within 4Å: Chain a: D.98 No protein-ligand interaction detected (PLIP) MG.214: 4 residues within 4Å: Chain 1: C.994 Chain R: G.82 Chain h: S.16, G.20 No protein-ligand interaction detected (PLIP)

5 x ZN: ZINC ION(Non-covalent)

ZN.22: 4 residues within 4Å: Chain 0: C.39, C.42, C.57, C.60 4 PLIP interactions: 4 interactions with chain 0 Metal complexes: 0:C.39, 0:C.42, 0:C.57, 0:C.60 ZN.209: 4 residues within 4Å: Chain 2: C.19, C.22, C.34, C.37 4 PLIP interactions: 4 interactions with chain 2 Metal complexes: 2:C.19, 2:C.22, 2:C.34, 2:C.37 ZN.210: 5 residues within 4Å: Chain 4: C.12, C.15, T.19, C.72, C.75 4 PLIP interactions: 4 interactions with chain 4 Metal complexes: 4:C.12, 4:C.15, 4:C.72, 4:C.75 ZN.212: 5 residues within 4Å: Chain a: C.96, C.99, C.110, C.115, S.118 4 PLIP interactions: 4 interactions with chain a Metal complexes: a:C.96, a:C.99, a:C.110, a:C.115 ZN.213: 5 residues within 4Å: Chain b: C.44, C.49, V.51, C.83, C.86 4 PLIP interactions: 4 interactions with chain b Metal complexes: b:C.44, b:C.49, b:C.83, b:C.86

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Klinge, S. et al., Crystal Structure of the Eukaryotic 60S Ribosomal Subunit in Complex with Initiation Factor 6. Science (2011)

Release Date

2014-07-09

Peptides

RPL8: C
RIBOSOMAL PROTEIN L3: D
RPL4: E
60S RIBOSOMAL PROTEIN L11: F
60S RIBOSOMAL PROTEIN L9: G
RPL7A: H
RPLP0: I
60S RIBOSOMAL PROTEIN L10: J
60S RIBOSOMAL PROTEIN L13A: K
RPL23: L
60S RIBOSOMAL PROTEIN L27A: M
RIBOSOMAL PROTEIN L15: N
60S RIBOSOMAL PROTEIN L5: O
RPL18: P
RPL19: Q
60S RIBOSOMAL PROTEIN L21: R
RPL17: S
RPL23A: T
RPL26: U
RPL24: V
RPL35: W
60S RIBOSOMAL PROTEIN L7: X
60S RIBOSOMAL PROTEIN L31: Y
60S RIBOSOMAL PROTEIN L32: Z
RPL37A: 0
RIBOSOMAL PROTEIN L37: 2
RPL39: 3
60S RIBOSOMAL PROTEIN L36A: 4
RPL6: 5
RPL14: 6
RPL30: 7
RPL35A: 8
TRANSLATION INITIATION FACTOR EIF-6, PUTATIVE FAMILY PROTEIN: 9
UBIQUITIN-60S RIBOSOMAL PROTEIN L40: a
RPL34: b
RIBOSOMAL PROTEIN L22: c
RPL27: d
RPL28: e
RPL38: f
60S RIBOSOMAL PROTEIN L36: g
RPL29: h
RPL13: i
RPL18A: j

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

C
EA

D
EB

E
EC

F
ED

G
EE

H
EF

I
EG

J
EH

K
EI

L
EJ

M
EK

N
EL

O
EM

P
EN

Q
EO

R
EP

S
EQ

T
ER

U
ES

V
ET

W
EU

X
EV

Y
EW

Z
EX

0
EY

2
FA

3
FB

4
FC

5
FE

6
FF

7
FG

8
FH

9
FJ

a
FK

b
FL

c
FM

d
FN

e
FO

f
FP

g
FQ

h
FT

i
FU

j
FX

RPL8

RIBOSOMAL PROTEIN L3

RPL4

60S RIBOSOMAL PROTEIN L11

60S RIBOSOMAL PROTEIN L9

RPL7A

RPLP0

60S RIBOSOMAL PROTEIN L10

60S RIBOSOMAL PROTEIN L13A

RPL23

60S RIBOSOMAL PROTEIN L27A

RIBOSOMAL PROTEIN L15

60S RIBOSOMAL PROTEIN L5

RPL18

RPL19

60S RIBOSOMAL PROTEIN L21

RPL17

RPL23A

RPL26

RPL24

RPL35

60S RIBOSOMAL PROTEIN L7

60S RIBOSOMAL PROTEIN L31

60S RIBOSOMAL PROTEIN L32

RPL37A

RIBOSOMAL PROTEIN L37

RPL39

60S RIBOSOMAL PROTEIN L36A

RPL6

RPL14

RPL30

RPL35A

TRANSLATION INITIATION FACTOR EIF-6, PUTATIVE FAMILY PROTEIN

UBIQUITIN-60S RIBOSOMAL PROTEIN L40

RPL34

RIBOSOMAL PROTEIN L22

RPL27

RPL28

RPL38

60S RIBOSOMAL PROTEIN L36

RPL29

RPL13

RPL18A

Related Entries With Identical Sequence