SMTL ID : 4wmq.2 (1 other biounit)

Structure of Human Intelectin-1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-trimer

Ligands

9 x CA: CALCIUM ION(Non-covalent)

CA.1: 4 residues within 4Å: Chain A: H.79, G.90, D.126, D.275 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.79, A:D.126, A:D.275, H2O.3, H2O.6 CA.2: 4 residues within 4Å: Chain A: E.80, D.82, G.85, D.91 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.82, A:G.85, A:D.91, H2O.4, H2O.4 CA.3: 3 residues within 4Å: Chain A: N.253, E.255, E.267 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:E.255, A:E.267, H2O.2, H2O.3, H2O.5 CA.4: 4 residues within 4Å: Chain B: H.79, G.90, D.126, D.275 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:H.79, B:D.126, B:D.275, H2O.15, H2O.18 CA.5: 4 residues within 4Å: Chain B: E.80, D.82, G.85, D.91 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:D.82, B:G.85, B:D.91, H2O.16, H2O.16 CA.6: 3 residues within 4Å: Chain B: N.253, E.255, E.267 5 PLIP interactions: 2 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:E.255, B:E.267, H2O.14, H2O.15, H2O.17 CA.7: 4 residues within 4Å: Chain C: H.79, G.90, D.126, D.275 5 PLIP interactions: 3 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:H.79, C:D.126, C:D.275, H2O.28, H2O.30 CA.8: 4 residues within 4Å: Chain C: E.80, D.82, G.85, D.91 5 PLIP interactions: 3 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:D.82, C:G.85, C:D.91, H2O.28, H2O.28 CA.9: 3 residues within 4Å: Chain C: N.253, E.255, E.267 5 PLIP interactions: 2 interactions with chain C, 3 Ligand-Water interactions Metal complexes: C:E.255, C:E.267, H2O.27, H2O.27, H2O.29

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wesener, D.A. et al., Recognition of microbial glycans by human intelectin-1. Nat.Struct.Mol.Biol. (2015)

Release Date

2015-07-01

Peptides

Intelectin-1: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
B

C
B

Intelectin-1

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