SMTL ID : 4woe.2 (1 other biounit)

The duplicated taurocyamine kinase from Schistosoma mansoni with bound transition state analog (TSA) components

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 11 residues within 4Å: Chain A: S.119, T.120, R.121, R.123, R.277, S.279, V.280, H.281, R.305, D.320 Ligands: MG.5 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:S.119, A:R.121, A:R.277, A:S.279, A:H.281 Water bridges: A:R.123 Salt bridges: A:R.121, A:R.121, A:R.123, A:R.277, A:R.277, A:R.305 pi-Stacking: A:H.281, A:H.281 ADP.2: 10 residues within 4Å: Chain A: S.482, R.484, R.486, R.589, R.640, S.642, V.643, L.644, R.669, D.684 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:S.482, A:R.484, A:R.640, A:S.642, A:R.669 Water bridges: A:R.486 Salt bridges: A:R.484, A:R.484, A:R.486, A:R.589, A:R.640, A:R.640, A:R.669

2 x 3S5: Taurocyamine(Non-covalent)

3S5.3: 7 residues within 4Å: Chain A: A.59, L.60, L.61, R.63, C.268, S.270, N.271 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:L.60, A:L.61, A:R.63, A:S.270, A:S.270, A:N.271 Water bridges: A:E.222 Salt bridges: A:R.63 3S5.4: 7 residues within 4Å: Chain A: S.422, I.423, C.424, R.426, E.585, C.631, S.633 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:I.423, A:C.424, A:C.424, A:R.426, A:S.633, A:S.633 Salt bridges: A:R.426, A:E.585

1 x MG: MAGNESIUM ION(Non-covalent)

MG.5: 2 residues within 4Å: Chain A: E.222 Ligands: ADP.1 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Merceron, R. et al., The Substrate-free and -bound Crystal Structures of the Duplicated Taurocyamine Kinase from the Human Parasite Schistosoma mansoni. J.Biol.Chem. (2015)

Release Date

2015-04-15

Peptides

Taurocyamine kinase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Taurocyamine kinase

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