SMTL ID : 4ws5.1

Crystal structure of Mycobacterium tuberculosis uracil-DNA glycosylase in complex with 5-nitrouracil, Form III

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

1 x 5NU: 5-nitrouracil(Non-covalent)

5NU.1: 9 residues within 4Å: Chain A: G.77, Q.78, D.79, Y.81, S.91, F.92, S.104, N.138, H.202 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:Q.78, A:D.79, A:Y.81, A:F.92, A:N.138, A:N.138 Water bridges: A:D.79, A:Y.81, A:Y.81, A:H.202, A:H.202 pi-Stacking: A:Y.81

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 3 residues within 4Å: Chain A: R.51, R.52, R.144 Ligand excluded by PLIP CL.3: 4 residues within 4Å: Chain A: Y.118, I.233, D.234, W.235 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Arif, S.M. et al., Structural plasticity in Mycobacterium tuberculosis uracil-DNA glycosylase (MtUng) and its functional implications. Acta Crystallogr.,Sect.D (2015)

Release Date

2015-07-15

Peptides

Uracil-DNA glycosylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Uracil-DNA glycosylase

Related Entries With Identical Sequence