SMTL ID : 4xfr.2 (2 other biounits)

Crystal structure of a domain of unknown function (DUF1537) from Bordetella bronchiseptica (BB3215), Target EFI-511620, with bound citrate, domain swapped dimer, space group P6522

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

2 x CIT: CITRIC ACID(Non-functional Binders)

CIT.1: 10 residues within 4Å: Chain A: D.34, T.36, G.37, R.81, K.110, D.112, S.113, R.116, R.147, S.239 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:T.36 Hydrogen bonds: A:G.37, A:R.81, A:D.112, A:D.112, A:S.113, A:R.116, A:R.147, A:R.147 Water bridges: A:D.34, A:K.110, A:K.110, A:D.112, A:S.113, A:R.116 Salt bridges: A:R.81, A:R.81, A:K.110, A:K.110 CIT.2: 11 residues within 4Å: Chain A: T.264, S.265, Q.266, H.267, T.358, G.359, G.360, D.361, G.362, G.405, G.406 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:D.361 Hydrogen bonds: A:T.264, A:S.265, A:G.360, A:D.361, A:G.362, A:G.405 Water bridges: A:G.406 Salt bridges: A:H.267, A:H.267

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, X. et al., Assignment of function to a domain of unknown function: DUF1537 is a new kinase family in catabolic pathways for acid sugars. Proc.Natl.Acad.Sci.USA (2016)

Release Date

2015-01-28

Peptides

Uncharacterized protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Uncharacterized protein

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