SMTL ID : 4xgp.2 (1 other biounit)

Crystal Structure of E112A/H234A Mutant of Stationary Phase Survival Protein (SurE) from Salmonella typhimurium co-crystallized and soaked with AMP.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: D.22, D.23, N.106 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.22, A:D.23, H2O.7, H2O.7, H2O.7 MG.5: 3 residues within 4Å: Chain B: D.22, D.23, N.106 5 PLIP interactions: 2 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:D.22, B:D.23, H2O.14, H2O.14, H2O.16

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 6 residues within 4Å: Chain A: V.25, H.26, Q.31, F.70, N.72, D.74 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:V.25, A:H.26, A:N.72, A:N.72 Water bridges: A:D.71 EDO.3: 3 residues within 4Å: Chain A: I.213, G.214, P.215 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.214 EDO.4: 2 residues within 4Å: Chain A: N.110, Y.117 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:P.109, A:N.110 Water bridges: A:N.106, A:G.119, A:G.119 EDO.6: 3 residues within 4Å: Chain B: G.214, P.215, P.216 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:G.214

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mathiharan, Y.K. et al., Insights into stabilizing interactions in the distorted domain-swapped dimer of Salmonella typhimurium survival protein. Acta Crystallogr.,Sect.D (2015)

Release Date

2015-09-09

Peptides

5'/3'-nucleotidase SurE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

5'/3'-nucleotidase SurE

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