- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- monomer
- Ligands
- 1 x NI: NICKEL (II) ION(Non-functional Binders)
- 2 x HIS: HISTIDINE(Non-covalent)
- 10 x GOL: GLYCEROL(Non-functional Binders)
GOL.4: 4 residues within 4Å:- Chain A: K.54, K.69, D.70, N.71
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:D.70
- Water bridges: A:E.67, A:E.67
GOL.6: 8 residues within 4Å:- Chain A: D.256, R.261, T.277, P.290, K.291, T.293, S.431, V.434
8 PLIP interactions:8 interactions with chain A- Hydrogen bonds: A:D.256, A:T.277, A:T.293, A:S.431
- Water bridges: A:R.261, A:R.261, A:T.293, A:T.293
GOL.7: 8 residues within 4Å:- Chain A: K.32, T.209, Q.444, V.446, K.456, G.461, I.462, Y.463
10 PLIP interactions:10 interactions with chain A- Hydrogen bonds: A:K.32, A:K.32, A:T.458
- Water bridges: A:D.210, A:Q.444, A:Q.444, A:T.458, A:G.461, A:G.461, A:G.461
GOL.8: 6 residues within 4Å:- Chain A: D.260, G.263, I.264, H.267, I.268, V.334
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:D.260, A:D.260
GOL.9: 5 residues within 4Å:- Chain A: T.109, A.110, K.114, L.115, T.116
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:T.109, A:L.115
- Water bridges: A:A.110
GOL.10: 4 residues within 4Å:- Chain A: K.318, K.349, Y.357, A.363
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:K.318, A:K.349
- Water bridges: A:D.360, A:S.362
GOL.11: 10 residues within 4Å:- Chain A: Q.58, N.60, D.61, T.62, T.63, T.119, S.121, A.122, Y.123, L.126
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:Q.58, A:N.60, A:T.63, A:S.121, A:Y.123, A:Y.123
- Water bridges: A:L.126
GOL.12: 6 residues within 4Å:- Chain A: Y.101, N.384, K.388, K.389, G.391
- Ligands: EPE.5
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:N.384, A:K.388
- Water bridges: A:K.388, A:K.388
GOL.13: 4 residues within 4Å:- Chain A: K.226, K.453, N.454, Y.455
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:K.226, A:N.454, A:N.454, A:Y.455, A:Y.455, A:Y.455
GOL.14: 4 residues within 4Å:- Chain A: K.349, V.351, D.352, D.353
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:K.349, A:K.349, A:D.352, A:D.353
- Water bridges: A:S.350
- 1 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lebrette, H. et al., Novel insights into nickel import in Staphylococcus aureus: the positive role of free histidine and structural characterization of a new thiazolidine-type nickel chelator. Metallomics (2015)
- Release Date
- 2015-02-11
- Peptides
- Nickel ABC transporter substrate-binding protein: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- monomer
- Ligands
- 1 x NI: NICKEL (II) ION(Non-functional Binders)
- 2 x HIS: HISTIDINE(Non-covalent)
- 10 x GOL: GLYCEROL(Non-functional Binders)
- 1 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lebrette, H. et al., Novel insights into nickel import in Staphylococcus aureus: the positive role of free histidine and structural characterization of a new thiazolidine-type nickel chelator. Metallomics (2015)
- Release Date
- 2015-02-11
- Peptides
- Nickel ABC transporter substrate-binding protein: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A