SMTL ID : 4xqd.1

X-ray structure analysis of xylanase-WT at pH4.0

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

homo-dimer

Ligands

6 x IOD: IODIDE ION(Non-functional Binders)

IOD.1: 1 residues within 4Å: Chain A: N.81 Ligand excluded by PLIP IOD.2: 4 residues within 4Å: Chain A: S.64, N.66, S.183, A.184 Ligand excluded by PLIP IOD.3: 3 residues within 4Å: Chain A: R.121, V.122, Q.124 Ligand excluded by PLIP IOD.5: 1 residues within 4Å: Chain B: S.145 Ligand excluded by PLIP IOD.6: 4 residues within 4Å: Chain B: S.64, N.66, S.183, A.184 Ligand excluded by PLIP IOD.7: 4 residues within 4Å: Chain B: G.23, V.24, T.25, N.37 Ligand excluded by PLIP

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.4: 3 residues within 4Å: Chain A: N.91, R.144, S.145 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.91, A:N.91, A:S.145

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wan, Q. et al., Direct determination of protonation states and visualization of hydrogen bonding in a glycoside hydrolase with neutron crystallography. Proc.Natl.Acad.Sci.USA (2015)

Release Date

2015-09-23

Peptides

Endo-1,4-beta-xylanase 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Endo-1,4-beta-xylanase 2

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