SMTL ID : 4xuh.2 (1 other biounit)

PPARgamma ligand binding domain in complex with sulindac sulfide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.22 Å

Oligo State

monomer

Ligands

2 x SFI: 2-[(3Z)-6-fluoranyl-2-methyl-3-[(4-methylsulfanylphenyl)methylidene]inden-1-yl]ethanoic acid(Non-covalent)

SFI.1: 14 residues within 4Å: Chain A: F.65, I.82, G.85, C.86, R.89, S.90, I.127, M.130, L.131, L.134, V.140, L.141, I.142 Ligands: SFI.2 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:R.89, A:I.127, A:L.131, A:I.142 Water bridges: A:R.89 Salt bridges: A:R.89 SFI.2: 17 residues within 4Å: Chain A: F.83, C.86, Q.87, S.90, H.124, I.127, Y.128, L.131, M.135, V.140, L.154, F.164, M.165, K.168, H.250, L.254 Ligands: SFI.1 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:F.83, A:Q.87, A:I.127, A:Y.128, A:L.131, A:F.164, A:K.168 Water bridges: A:K.258 Salt bridges: A:H.124, A:H.250 pi-Cation interactions: A:H.250, A:H.250 Halogen bonds: A:H.124

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Puhl, A.C. et al., Mechanisms of peroxisome proliferator activated receptor gamma regulation by non-steroidal anti-inflammatory drugs. Nucl Recept Signal (2015)

Release Date

2016-07-27

Peptides

Peroxisome proliferator-activated receptor gamma: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Peroxisome proliferator-activated receptor gamma

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