SMTL ID : 8sc9.2 (1 other biounit)

Structure of PPARG in complex with MTX-531

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

monomer

Ligands

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: K.223, S.230, Q.231 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:S.230, A:Q.231, A:Q.231 Water bridges: A:K.223, A:K.223 Salt bridges: A:K.223 SO4.2: 5 residues within 4Å: Chain A: R.35, L.38, T.39, N.136, K.137 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.136 Water bridges: A:R.35, A:R.35, A:K.137 SO4.3: 7 residues within 4Å: Chain A: I.37, L.38, G.40, P.47, V.49, N.136, F.148 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:I.37 Water bridges: A:N.136 SO4.4: 5 residues within 4Å: Chain A: Y.121, D.197, R.198, P.199, R.244 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.198, A:R.244 SO4.5: 2 residues within 4Å: Chain A: R.35, T.39 No protein-ligand interaction detected (PLIP)

1 x D0D: N-[(5P)-2-chloro-5-(4-{[(1R)-1-phenylethyl]amino}quinazolin-6-yl)pyridin-3-yl]methanesulfonamide(Non-covalent)

D0D.6: 20 residues within 4Å: Chain A: F.27, P.28, L.29, F.83, C.86, Q.87, R.89, S.90, A.93, E.96, I.97, I.127, Y.128, M.130, L.131, L.134, F.164, M.165, K.168, H.250 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:F.83, A:Q.87, A:R.89, A:I.127, A:Y.128, A:L.134 Hydrogen bonds: A:R.89, A:R.89, A:S.90, A:E.96 Water bridges: A:R.89, A:R.89 pi-Stacking: A:H.250

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Whitehead, C.E. et al., Structure of PPARG in complex with MTX-531. To Be Published

Release Date

2024-06-12

Peptides

Peroxisome proliferator-activated receptor gamma: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Peroxisome proliferator-activated receptor gamma

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