SMTL ID : 4xxb.1

Crystal structure of human MDM2-RPL11

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-1-1-mer

Ligands

1 x IMD: IMIDAZOLE(Non-covalent)

IMD.1: 9 residues within 4Å: Chain A: N.23, C.25, S.51, I.68, A.69 Chain B: P.27, H.29, N.31 Ligands: ZN.3 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.31 Water bridges: B:N.31

1 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)

BME.2: 6 residues within 4Å: Chain A: K.19, C.21, Y.131 Chain B: D.5, P.25, L.26 No protein-ligand interaction detected (PLIP)

2 x ZN: ZINC ION(Non-covalent)

ZN.3: 3 residues within 4Å: Chain A: C.25 Chain B: H.29 Ligands: IMD.1 3 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B, 1 Ligand-Water interactions Metal complexes: A:C.25, B:H.29, H2O.1 ZN.4: 4 residues within 4Å: Chain B: C.16, C.19, C.30, C.33 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.16, B:C.19, B:C.30, B:C.33

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zheng, J. et al., Structure of human MDM2 complexed with RPL11 reveals the molecular basis of p53 activation. Genes Dev. (2015)

Release Date

2015-08-12

Peptides

60S ribosomal protein L11: A
E3 ubiquitin-protein ligase Mdm2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

60S ribosomal protein L11

E3 ubiquitin-protein ligase Mdm2

Related Entries With Identical Sequence