SMTL ID : 4y0g.1 (1 other biounit)

beta2 carbohydrate binding module (CBM) of AMP-activated protein kinase (AMPK)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

6 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: V.14, I.15, R.16, E.73, I.87 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.16 Water bridges: A:E.73, A:E.73 GOL.2: 6 residues within 4Å: Chain A: I.37, P.38, I.40, A.48, I.49, L.50 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:I.49 GOL.3: 4 residues within 4Å: Chain A: F.30, N.31, L.50, D.51 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.51 Water bridges: A:N.31, A:D.51 GOL.4: 6 residues within 4Å: Chain A: S.27, W.33, S.34, T.35, K.36, W.67 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.27, A:S.34 Water bridges: A:K.36 GOL.5: 2 residues within 4Å: Chain A: G.55, E.56 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:E.56, A:E.56 Water bridges: A:G.55, A:E.56, A:E.56, A:H.88 GOL.6: 3 residues within 4Å: Chain A: V.68, H.69, P.71 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.69, A:H.69 Water bridges: A:H.69

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mobbs, J.I. et al., Determinants of oligosaccharide specificity of the carbohydrate-binding modules of AMP-activated protein kinase. Biochem.J. (2015)

Release Date

2015-04-08

Peptides

5'-AMP-activated protein kinase subunit beta-2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

5'-AMP-activated protein kinase subunit beta-2

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