SMTL ID : 4yg3.1

Structural basis of glycan recognition in neonate-specific rotaviruses

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.29 Å

Oligo State

monomer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: N.23, H.99, R.100 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.100 Water bridges: A:A.98 Salt bridges: A:R.100 SO4.2: 1 residues within 4Å: Chain A: R.92 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.92 SO4.3: 1 residues within 4Å: Chain A: R.100 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.100

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hu, L. et al., Structural basis of glycan specificity in neonate-specific bovine-human reassortant rotavirus. Nat Commun (2015)

Release Date

2015-09-30

Peptides

Outer capsid protein VP4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Outer capsid protein VP4

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