SMTL ID : 4yjl.4 (5 other biounits)

Crystal structure of APC-ARM in complexed with Amer1-A2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

hetero-1-1-mer

Ligands

7 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 7 residues within 4Å: Chain A: C.86, G.90, L.91, R.101, A.131, A.134, Q.135 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.90, A:R.101, A:Q.135 EDO.2: 5 residues within 4Å: Chain A: L.188, F.218, G.221, T.222, Y.225 No protein-ligand interaction detected (PLIP) EDO.3: 4 residues within 4Å: Chain A: H.6, H.8, M.9, L.59 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.6, A:H.8, A:M.9 EDO.4: 6 residues within 4Å: Chain A: A.250, T.251, E.253, R.256, R.293, N.294 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.251, A:R.293 Water bridges: A:N.294 EDO.5: 7 residues within 4Å: Chain A: V.212, D.213, G.214, A.215, L.216, A.217, I.258 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.214, A:L.216, A:A.217 Water bridges: A:A.215, A:A.215 EDO.6: 7 residues within 4Å: Chain A: M.69, N.70, G.73, G.74, L.75, Q.76, N.118 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:M.69, A:L.75, A:Q.76 EDO.7: 5 residues within 4Å: Chain A: P.40, M.41, P.42, E.46, H.47 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:M.41

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Z. et al., Structures of the APC-ARM domain in complexes with discrete Amer1/WTX fragments reveal that it uses a consensus mode to recognize its binding partners. Cell Discov (2015)

Release Date

2016-03-09

Peptides

Adenomatous polyposis coli protein: A
APC membrane recruitment protein 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
I

Adenomatous polyposis coli protein

APC membrane recruitment protein 1

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