SMTL ID : 4yjl.5 (5 other biounits)

Crystal structure of APC-ARM in complexed with Amer1-A2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

hetero-1-1-mer

Ligands

7 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 7 residues within 4Å: Chain A: M.69, N.70, G.73, G.74, L.75, Q.76, N.118 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:M.69, A:L.75, A:Q.76 EDO.2: 4 residues within 4Å: Chain A: E.139, S.140, E.141, D.142 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.141, A:D.142, A:D.142 EDO.3: 4 residues within 4Å: Chain A: F.218, G.221, T.222, Y.225 No protein-ligand interaction detected (PLIP) EDO.4: 5 residues within 4Å: Chain A: T.22, P.40, P.42, E.46, H.47 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:P.40, A:H.47 EDO.5: 7 residues within 4Å: Chain A: C.86, G.90, L.91, R.101, A.131, A.134, Q.135 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.90, A:R.101, A:Q.135 EDO.6: 5 residues within 4Å: Chain A: H.6, H.7, H.8, M.9, L.59 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.6, A:H.8, A:M.9 EDO.7: 1 residues within 4Å: Chain A: E.28 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.28

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Z. et al., Structures of the APC-ARM domain in complexes with discrete Amer1/WTX fragments reveal that it uses a consensus mode to recognize its binding partners. Cell Discov (2015)

Release Date

2016-03-09

Peptides

Adenomatous polyposis coli protein: A
APC membrane recruitment protein 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
J

Adenomatous polyposis coli protein

APC membrane recruitment protein 1

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