SMTL ID : 4yo0.2 (1 other biounit)

Crystal structure of monoclonal anti-human podoplanin antibody NZ-1 with bound PA peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.56 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: P.60, G.63 Chain B: N.27, G.121, G.122 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:N.27 Water bridges: A:K.62

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fujii, Y. et al., Tailored placement of a turn-forming PA tag into the structured domain of a protein to probe its conformational state. J.Cell.Sci. (2016)

Release Date

2016-03-02

Peptides

Heavy chain of antigen binding fragment, Fab: A
Light chain of antigen binding fragment, Fab: B
PA14 peptide: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

C
F

Heavy chain of antigen binding fragment, Fab

Light chain of antigen binding fragment, Fab

PA14 peptide

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