SMTL ID : 5xcv.1 (1 other biounit)

Crystal structure of NZ-1 Fv-clasp fragment with its antigen peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.14 Å

Oligo State

hetero-1-1-1-mer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1: 2 residues within 4Å: Chain A: E.153, Q.156 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.153, A:E.153, H2O.2 CA.2: 1 residues within 4Å: Chain A: D.135 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.135

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Arimori, T. et al., Fv-clasp: An Artificially Designed Small Antibody Fragment with Improved Production Compatibility, Stability, and Crystallizability. Structure (2017)

Release Date

2017-10-11

Peptides

VH(S112C)-SARAH chimera,VH(S112C)-SARAH chimera: A
VL-SARAH(S37C) chimera,VL-SARAH(S37C) chimera: B
PA14 peptide: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

VH(S112C)-SARAH chimera,VH(S112C)-SARAH chimera

VL-SARAH(S37C) chimera,VL-SARAH(S37C) chimera

PA14 peptide

Related Entries With Identical Sequence