SMTL ID : 4ypd.1

Crystal Structure of DAPK1 catalytic domain in complex with the hinge binding fragment 4-methylpyridazine

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 4 residues within 4Å: Chain A: K.41, L.92, D.160 Ligands: DKG.3 Ligand excluded by PLIP

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: F.235, K.248, R.252 4 PLIP interactions: 4 interactions with chain A Water bridges: A:F.235, A:K.248 Salt bridges: A:K.248, A:R.252

1 x DKG: 4-methylpyridazine(Non-covalent)

DKG.3: 10 residues within 4Å: Chain A: L.18, V.26, A.39, I.76, L.92, E.93, L.94, V.95, M.145 Ligands: CL.1 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:V.26, A:A.39, A:I.76, A:L.92 Hydrogen bonds: A:V.95

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Grum-Tokars, V.L. et al., Crystal Structure of DAPK1 catalytic domain in complex with hinge binding fragments. To Be Published

Release Date

2015-05-13

Peptides

Death-associated protein kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Death-associated protein kinase 1

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