SMTL ID : 4ypq.1

Crystal structure of the ROR(gamma)t ligand binding domain in complex with 4-(1-(2-chloro-6-(trifluoromethyl)benzoyl)-1H-indazol-3-yl)benzoic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.32 Å

Oligo State

monomer

Ligands

1 x 4F1: 4-{1-[2-chloro-6-(trifluoromethyl)benzoyl]-1H-indazol-3-yl}benzoic acid(Non-covalent)

4F1.1: 18 residues within 4Å: Chain A: W.53, A.57, L.60, T.61, I.64, Q.65, L.89, K.90, V.216, L.219, Q.220, Q.223, A.232, A.233, F.234, Y.238, L.241, F.242 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:W.53, A:I.64, A:I.64, A:L.219, A:Q.223, A:L.241, A:L.241, A:F.242, A:F.242, A:F.242 Hydrogen bonds: A:Q.65, A:A.233, A:F.234, A:F.234 Halogen bonds: A:V.216

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 1 residues within 4Å: Chain A: C.191 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Scheepstra, M. et al., Identification of an allosteric binding site for ROR gamma t inhibition. Nat Commun (2015)

Release Date

2015-12-23

Peptides

Nuclear receptor ROR-gamma: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Nuclear receptor ROR-gamma

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