SMTL ID : 4z1i.1 (1 other biounit)

Crystal structure of human Trap1 with AMPPNP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.30 Å

Oligo State

homo-dimer

Ligands

2 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)(Covalent)

ANP.1: 20 residues within 4Å: Chain A: E.56, N.60, A.64, K.67, D.99, M.104, N.112, S.119, G.120, S.121, G.140, Q.141, F.142, G.143, V.144, G.145, F.146, T.192, R.343 Ligands: MG.2 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:N.60, A:K.67, A:D.99, A:S.119, A:S.119, A:G.120, A:S.121, A:S.121, A:S.121, A:Q.141, A:F.142, A:G.143, A:V.144, A:G.145, A:F.146, A:R.343, A:R.343 ANP.3: 23 residues within 4Å: Chain B: E.56, N.60, A.61, A.64, K.67, D.99, M.104, N.112, L.113, R.118, S.119, G.120, S.121, G.140, Q.141, F.142, G.143, V.144, G.145, F.146, T.192, R.343 Ligands: MG.4 18 PLIP interactions: 18 interactions with chain B Hydrogen bonds: B:K.67, B:K.67, B:D.99, B:S.119, B:S.119, B:G.120, B:S.121, B:S.121, B:S.121, B:Q.141, B:F.142, B:G.143, B:V.144, B:G.145, B:F.146, B:T.192, B:R.343, B:R.343

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 2 residues within 4Å: Chain A: N.60 Ligands: ANP.1 No protein-ligand interaction detected (PLIP) MG.4: 3 residues within 4Å: Chain B: N.60, G.145 Ligands: ANP.3 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, C. et al., Development of a Mitochondria-Targeted Hsp90 Inhibitor Based on the Crystal Structures of Human TRAP1. J.Am.Chem.Soc. (2015)

Release Date

2015-04-29

Peptides

Heat shock protein 75 kDa, mitochondrial: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Heat shock protein 75 kDa, mitochondrial

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