SMTL ID : 5y3o.1

Structure of TRAP1 complexed with DN320

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x 8M9: 4-chloranyl-1-[(4-methoxy-3,5-dimethyl-pyridin-2-yl)methyl]pyrazolo[3,4-d]pyrimidin-6-amine(Non-covalent)

8M9.1: 13 residues within 4Å: Chain A: N.60, A.64, D.99, I.102, G.103, M.104, L.109, F.142, F.146, Y.147, V.158, W.172, T.192 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:F.146 Hydrogen bonds: A:T.192, A:T.192 Water bridges: A:A.61, A:D.99 Salt bridges: A:D.99 pi-Stacking: A:F.142, A:F.142, A:F.146 Halogen bonds: A:G.103

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Park, H.K. et al., Paralog Specificity Determines Subcellular Distribution, Action Mechanism, and Anticancer Activity of TRAP1 Inhibitors. J. Med. Chem. (2017)

Release Date

2017-08-30

Peptides

Heat shock protein 75 kDa, mitochondrial: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Heat shock protein 75 kDa, mitochondrial

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