SMTL ID : 4z34.1

Crystal Structure of Human Lysophosphatidic Acid Receptor 1 in complex with ONO9780307

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

monomer

Ligands

1 x ON7: {1-[(2S,3S)-2-(2,3-dihydro-1H-inden-2-ylmethyl)-3-(3,5-dimethoxy-4-methylphenyl)-3-hydroxypropyl]-4-(methoxycarbonyl)-1 H-pyrrol-3-yl}acetic acid(Non-covalent)

ON7.1: 23 residues within 4Å: Chain A: Y.52, K.57, H.58, V.70, Y.120, T.127, T.131, R.142, Q.143, I.146, D.147, L.150, M.216, L.225, W.228, W.380, G.383, L.386, L.387, E.402, K.403, F.405, L.406 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.150, A:W.380, A:L.386, A:L.387, A:L.387 Hydrogen bonds: A:Y.52, A:G.128, A:Q.143 Salt bridges: A:K.57, A:H.58, A:R.142 pi-Cation interactions: A:K.57

1 x 1WV: (2S)-2,3-dihydroxypropyl (7Z)-tetradec-7-enoate(Non-covalent)

1WV.2: 6 residues within 4Å: Chain A: L.140, L.141, L.145, T.148, G.197, S.201 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:L.145 Hydrogen bonds: A:T.148, A:S.201

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chrencik, J.E. et al., Crystal Structure of Antagonist Bound Human Lysophosphatidic Acid Receptor 1. Cell (2015)

Release Date

2015-06-03

Peptides

Lysophosphatidic acid receptor 1, Soluble cytochrome b562: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Lysophosphatidic acid receptor 1, Soluble cytochrome b562

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