SMTL ID : 4z35.1

Crystal Structure of Human Lysophosphatidic Acid Receptor 1 in complex with ONO-9910539

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

monomer

Ligands

1 x ON9: 3-{1-[(2S,3S)-3-(4-acetyl-3,5-dimethoxyphenyl)-2-(2,3-dihydro-1H-inden-2-ylmethyl)-3-hydroxypropyl]-4-(methoxycarbonyl)-1H-pyrrol-3-yl}propanoic acid(Non-covalent)

ON9.1: 20 residues within 4Å: Chain A: Y.52, K.57, T.131, R.142, Q.143, I.146, D.147, L.150, M.216, L.225, W.228, W.380, G.383, L.384, L.386, L.387, E.402, K.403, F.405, L.406 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:L.150, A:W.380, A:L.386, A:L.387, A:L.387, A:F.405 Hydrogen bonds: A:Y.52, A:T.131, A:T.131, A:Q.143 Water bridges: A:K.57, A:K.57 Salt bridges: A:K.57, A:H.58, A:R.142

1 x 1WV: (2S)-2,3-dihydroxypropyl (7Z)-tetradec-7-enoate(Non-covalent)

1WV.2: 5 residues within 4Å: Chain A: L.140, L.145, T.148, G.197, S.201 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:L.145 Hydrogen bonds: A:T.148, A:G.197, A:S.201

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chrencik, J.E. et al., Crystal Structure of Antagonist Bound Human Lysophosphatidic Acid Receptor 1. Cell (2015)

Release Date

2015-06-03

Peptides

Lysophosphatidic acid receptor 1,Soluble cytochrome b562: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Lysophosphatidic acid receptor 1,Soluble cytochrome b562

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