SMTL ID : 4z5w.2 (1 other biounit)

The plant peptide hormone receptor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x TYS- ILE- TYS- THR- GLN: Phytosulfokine(Non-covalent)

TYS-ILE-TYS-THR-GLN.1: 26 residues within 4Å: Chain A: R.287, A.311, S.312, N.333, A.335, K.336, S.357, S.359, T.385, L.386, I.408, A.410, S.411, L.430, D.432, S.434, W.435, Y.454, P.491, F.492, F.493, K.494, K.495, F.511 Ligands: NAG.3, NAG.4 31 PLIP interactions: 31 interactions with chain A Hydrophobic interactions: A:A.335, A:T.385, A:I.408, A:A.410, A:L.430, A:Y.454, A:F.492, A:F.493, A:F.493, A:K.495, A:K.495, A:F.511, A:F.511 Hydrogen bonds: A:S.312, A:N.333, A:K.336, A:S.357, A:S.357, A:S.359, A:S.359, A:S.411, A:D.432, A:F.493, A:F.493, A:K.495, A:K.495 Water bridges: A:S.312 Salt bridges: A:R.287, A:K.495 pi-Stacking: A:W.435, A:W.435

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.2: 4 residues within 4Å: Chain A: Q.413, W.435, N.459, Y.519 No protein-ligand interaction detected (PLIP)

6 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.3: 6 residues within 4Å: Chain A: S.264, N.265, L.266, R.287, N.288 Ligands: TYS-ILE-TYS-THR-GLN.1 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.264, A:N.265, A:R.287, A:R.287, A:N.288 NAG.4: 4 residues within 4Å: Chain A: K.336, N.360, L.386 Ligands: TYS-ILE-TYS-THR-GLN.1 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:L.386 Hydrogen bonds: A:N.360 NAG.5: 6 residues within 4Å: Chain A: G.71, R.72, N.93, T.95, V.115, D.117 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:V.115 Hydrogen bonds: A:R.72, A:N.93, A:D.117 NAG.6: 6 residues within 4Å: Chain A: N.277, R.279, Y.296, N.298, S.300, A.301 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.279, A:Y.296, A:N.298 NAG.7: 4 residues within 4Å: Chain A: W.258, S.280, S.282, N.304 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.282, A:N.304 NAG.8: 3 residues within 4Å: Chain A: Q.342, N.365, S.368 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.342, A:N.365, A:S.368

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, J. et al., Allosteric receptor activation by the plant peptide hormone phytosulfokine. Nature (2015)

Release Date

2016-03-02

Peptides

Phytosulfokine receptor 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Phytosulfokine receptor 1

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