SMTL ID : 4zfi.4 (3 other biounits)

Structure of Mdm2 with low molecular weight inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x 4NJ: (5S)-3,5-bis(4-chlorobenzyl)-4-(6-chloro-1H-indol-3-yl)-5-hydroxy-1-methyl-1,5-dihydro-2H-pyrrol-2-one(Non-covalent)

4NJ.1: 9 residues within 4Å: Chain A: L.38, F.39, G.42, I.45, Y.51, V.77, H.80, I.83, Y.84 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.38, A:F.39, A:I.45, A:V.77 Water bridges: A:F.39 pi-Stacking: A:H.80 Halogen bonds: A:H.80

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Surmiak, E. et al., A Unique Mdm2-Binding Mode of the 3-Pyrrolin-2-one- and 2-Furanone-Based Antagonists of the p53-Mdm2 Interaction. ACS Chem. Biol. (2016)

Release Date

2016-10-19

Peptides

E3 ubiquitin-protein ligase Mdm2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

E3 ubiquitin-protein ligase Mdm2

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