SMTL ID : 4zr1.1 (1 other biounit)

Hydroxylase domain of scs7p

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.177, H.232, H.236, H.251, H.255 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:H.177, A:H.232, A:H.236, A:H.251, A:H.255 ZN.2: 5 residues within 4Å: Chain A: H.150, H.155, H.174, H.178, H.254 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:H.150, A:H.155, A:H.174, A:H.178, A:H.254

6 x BOG: octyl beta-D-glucopyranoside(Non-covalent)

BOG.3: 12 residues within 4Å: Chain A: L.99, T.100, F.154, L.172, L.173, H.174, H.177, R.186, L.187, M.189, P.190, L.193 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:L.172 Hydrogen bonds: A:H.174, A:H.177, A:R.186 BOG.4: 4 residues within 4Å: Chain A: W.142, C.227, F.243, T.266 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:T.266 Hydrogen bonds: A:F.243 BOG.5: 7 residues within 4Å: Chain A: C.227, C.231, F.234, S.238, K.239, L.240 Ligands: BOG.6 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:F.234, A:F.234, A:L.240 Hydrogen bonds: A:S.238, A:S.238, A:K.239 BOG.6: 5 residues within 4Å: Chain A: W.104, F.233, F.234 Ligands: BOG.5, BOG.7 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:F.234, A:F.234 BOG.7: 5 residues within 4Å: Chain A: W.104, W.105, K.184 Ligands: BOG.6, BOG.8 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:W.104, A:W.104, A:W.105 BOG.8: 4 residues within 4Å: Chain A: W.105, V.109, Y.185 Ligands: BOG.7 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:W.105, A:W.105, A:W.105, A:V.109

2 x TRD: TRIDECANE(Non-covalent)

TRD.9: 8 residues within 4Å: Chain A: V.137, G.138, W.142, L.149, F.194, V.205, G.217, G.221 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:V.137, A:W.142, A:L.149, A:F.194, A:V.205 TRD.10: 5 residues within 4Å: Chain A: C.198, A.199, Y.202, K.203, F.218 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:A.199, A:Y.202, A:Y.202, A:F.218

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhu, G. et al., The Crystal Structure of an Integral Membrane Fatty Acid alpha-Hydroxylase. J.Biol.Chem. (2015)

Release Date

2015-07-29

Peptides

Ceramide very long chain fatty acid hydroxylase SCS7: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Ceramide very long chain fatty acid hydroxylase SCS7

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