SMTL ID : 4zzu.1

Geotrichum candidum Cel7A structure complex with thio-linked cellotetraose at 1.4A

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.44 Å

Oligo State

monomer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 5 residues within 4Å: Chain A: D.64, Q.190, G.205, N.206, N.239 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.190, A:N.160 Hydrophobic interactions: A:V.169, A:F.182, A:F.182 Water bridges: A:G.185

1 x SGC- BGC: beta-D-glucopyranose-(1-4)-4-thio-beta-D-glucopyranose(Non-covalent)

SGC-BGC.2: 9 residues within 4Å: Chain A: Q.175, H.228, T.246, R.251, P.258, D.259, R.267, W.380, R.399 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:Q.175, A:H.228, A:H.228, A:T.246, A:R.251, A:R.251, A:R.251, A:D.343, A:W.380, A:R.399 Water bridges: A:T.226, A:Y.386, A:Y.252, A:R.267, A:R.399 Salt bridges: A:R.267, A:R.399

1 x SGC- SGC- SGC- BGC: beta-D-glucopyranose-(1-4)-4-thio-beta-D-glucopyranose-(1-4)-4-thio-beta-D-glucopyranose-(1-4)-4-thio-beta-D-glucopyranose

SGC-SGC-SGC-BGC.3: 19 residues within 4Å: Chain A: N.37, W.38, G.53, Q.101, K.102, N.103, V.104, R.107, Y.145, Y.171, D.173, D.179, L.180, K.181, N.200, S.201, S.369, W.371, D.372 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:G.53, A:Q.101, A:K.102, A:K.102, A:N.37, A:V.104, A:K.181, A:K.181 Water bridges: A:K.102, A:V.104, A:N.200, A:N.200, A:Y.51, A:V.104, A:D.179

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.4: 3 residues within 4Å: Chain A: T.48, N.57, L.60 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.48, A:N.57 Water bridges: A:N.57 NAG.5: 2 residues within 4Å: Chain A: F.306, N.432 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.432 Water bridges: A:Q.291

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.6: 4 residues within 4Å: Chain A: P.148, A.150, T.234, A.362 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:A.362 Water bridges: A:A.150, A:A.151, A:T.234

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Borisova, A.S. et al., Sequencing, Biochemical Characterization, Crystal Structure and Molecular Dynamics of Cellobiohydrolase Cel7A from Geotrichum Candidum 3C. FEBS J. (2015)

Release Date

2015-09-23

Peptides

CELLOBIOHYDROLASE I: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

CELLOBIOHYDROLASE I

Related Entries With Identical Sequence