SMTL ID : 5a05.2 (2 other biounits)

Crystal structure of aldose-aldose oxidoreductase from Caulobacter crescentus complexed with maltotriose

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

1 x BGC- GLC- GLC: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose(Non-covalent)

BGC-GLC-GLC.1: 13 residues within 4Å: Chain A: K.104, R.132, G.162, F.163, R.172, D.185, I.186, Y.189, N.248, P.263, S.266, Y.267 Ligands: NDP.2 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:R.132, A:R.172, A:R.172, A:R.172, A:N.248 Salt bridges: A:K.104, A:R.132

2 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NDP.2: 27 residues within 4Å: Chain A: G.13, L.14, G.15, Y.16, Y.17, S.39, G.40, T.41, K.44, Y.62, I.80, T.81, P.82, N.83, L.85, H.86, E.103, K.104, P.105, G.130, R.132, W.171, R.172, D.185, Y.189, Y.267 Ligands: BGC-GLC-GLC.1 24 PLIP interactions: 24 interactions with chain A Hydrophobic interactions: A:Y.17 Hydrogen bonds: A:L.14, A:Y.16, A:Y.17, A:G.40, A:T.41, A:Y.62, A:T.81, A:E.103, A:K.104, A:R.132, A:D.185, A:Y.189 Water bridges: A:G.15, A:Y.17, A:A.18, A:K.44, A:K.44, A:R.132, A:R.172, A:R.172 Salt bridges: A:K.44, A:R.172 pi-Stacking: A:Y.17 NDP.3: 27 residues within 4Å: Chain B: G.13, L.14, G.15, Y.16, Y.17, S.39, G.40, T.41, K.44, Y.62, I.80, T.81, P.82, N.83, L.85, H.86, E.103, K.104, P.105, G.130, R.132, W.171, R.172, L.177, Y.189, Y.267 Ligands: MLI.4 24 PLIP interactions: 24 interactions with chain B Hydrophobic interactions: B:Y.17 Hydrogen bonds: B:L.14, B:Y.16, B:Y.17, B:G.40, B:Y.62, B:Y.62, B:T.81, B:E.103, B:K.104, B:R.132, B:D.185, B:D.185 Water bridges: B:G.15, B:A.18, B:T.41, B:T.41, B:R.132, B:R.132, B:R.172, B:R.172 Salt bridges: B:K.44, B:R.172 pi-Stacking: B:Y.17

1 x MLI: MALONATE ION(Non-functional Binders)

MLI.4: 7 residues within 4Å: Chain B: K.104, R.132, F.163, R.172, D.185, Y.189 Ligands: NDP.3 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:Y.189 Water bridges: B:R.132 Salt bridges: B:K.104, B:K.104, B:R.132, B:R.172

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Taberman, H. et al., Structure and Function of Caulobacter Crescentus Aldose-Aldose Oxidoreductase. Biochem.J. (2015)

Release Date

2015-10-21

Peptides

ALDOSE-ALDOSE OXIDOREDUCTASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
F

ALDOSE-ALDOSE OXIDOREDUCTASE

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