SMTL ID : 5a7c.4 (3 other biounits)

Crystal structure of the second bromodomain of human BRD3 in complex with compound

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x 5D4: N-(6-ACETAMIDOHEXYL)ACETAMIDE

5D4.1: 8 residues within 4Å: Chain A: W.29, P.30, F.31, V.35, C.84, N.88, H.92, M.97 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:W.29, A:P.30, A:F.31, A:V.35 Hydrogen bonds: A:N.88

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 3 residues within 4Å: Chain A: Q.102, D.103, E.106 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nilsson, L.M. et al., Cancer Differentiating Agent Hexamethylene Bisacetamide Inhibits Bet Bromodomain Proteins. Cancer Res. (2016)

Release Date

2016-03-16

Peptides

BROMODOMAIN-CONTAINING PROTEIN 3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

BROMODOMAIN-CONTAINING PROTEIN 3

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