SMTL ID : 5ar3.1

RIP2 Kinase Catalytic Domain (1 - 310) complex with AMP-PCP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.23 Å

Oligo State

homo-dimer

Ligands

2 x ACP: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER(Non-covalent)

ACP.1: 18 residues within 4Å: Chain A: L.40, S.41, A.44, S.45, G.46, V.48, A.61, K.63, T.111, E.112, Y.113, M.114, E.121, Q.166, N.167, L.169, D.180 Ligands: MG.2 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:S.41, A:A.44, A:K.63, A:T.111, A:T.111, A:M.114, A:E.121, A:Q.166 Water bridges: A:A.44, A:K.164 Salt bridges: A:K.63 ACP.3: 20 residues within 4Å: Chain B: L.40, S.41, G.43, A.44, S.45, G.46, V.48, A.61, K.63, L.95, T.111, E.112, Y.113, M.114, E.121, Q.166, N.167, L.169, D.180 Ligands: MG.4 14 PLIP interactions: 14 interactions with chain B Hydrogen bonds: B:S.41, B:A.44, B:S.45, B:G.46, B:K.63, B:T.111, B:E.112, B:M.114, B:S.118, B:E.121, B:Q.166, B:D.180 Water bridges: B:S.45 Salt bridges: B:K.63

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: N.167, D.180 Ligands: ACP.1 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.180, H2O.1 MG.4: 3 residues within 4Å: Chain B: N.167, D.180 Ligands: ACP.3 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:D.180

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Charnley, A.K. et al., Crystal Structures of Human Rip2 Kinase Catalytic Domain Complexed with ATP-Competitive Inhibitors: Foundations for Understanding Inhibitor Selectivity. Bioorg.Med.Chem. (2015)

Release Date

2015-10-21

Peptides

RECEPTOR-INTERACTING SERINE/THREONINE-PROTEIN KINASE 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

RECEPTOR-INTERACTING SERINE/THREONINE-PROTEIN KINASE 2

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