SMTL ID : 5bvn.1

Fragment-based discovery of potent and selective DDR1/2 inhibitors

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.21 Å

Oligo State

monomer

Ligands

1 x IOD: IODIDE ION(Non-functional Binders)

IOD.1: 3 residues within 4Å: Chain A: F.256, G.257, Q.258 Ligand excluded by PLIP

1 x 4VD: N-[5-({[(3-fluorophenyl)carbamoyl]amino}methyl)-2-methylphenyl]imidazo[1,2-a]pyridine-3-carboxamide(Non-covalent)

4VD.2: 24 residues within 4Å: Chain A: L.27, V.35, A.64, V.65, K.66, E.83, I.86, M.87, L.90, I.95, I.96, M.110, T.112, D.113, Y.114, M.115, G.118, F.173, H.175, L.184, I.193, A.194, D.195, F.196 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:L.27, A:L.27, A:V.35, A:A.64, A:K.66, A:K.66, A:I.86, A:I.96, A:I.96, A:T.112, A:Y.114, A:F.173, A:F.173, A:D.195, A:F.196 Hydrogen bonds: A:E.83, A:E.83, A:T.112, A:M.115, A:D.195 Water bridges: A:K.66

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Murray, C.W. et al., Fragment-Based Discovery of Potent and Selective DDR1/2 Inhibitors. Acs Med.Chem.Lett. (2015)

Release Date

2015-08-12

Peptides

Epithelial discoidin domain-containing receptor 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Epithelial discoidin domain-containing receptor 1

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