SMTL ID : 5c03.1 (1 other biounit)

Crystal Structure of kinase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x AGS: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER(Non-covalent)

AGS.1: 20 residues within 4Å: Chain A: L.66, Q.68, G.69, T.70, T.72, V.74, V.111, K.113, E.159, Y.160, V.161, P.165, N.205, R.209, N.210, L.212, P.231, G.232 Ligands: MG.2, EDO.5 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:T.70, A:T.70, A:T.72, A:E.159, A:V.161, A:N.205, A:R.209, A:N.210 Water bridges: A:K.113, A:K.113, A:T.158, A:R.209 Salt bridges: A:K.113, A:R.209

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: N.210, S.229 Ligands: AGS.1 No protein-ligand interaction detected (PLIP)

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 3 residues within 4Å: Chain A: G.236, L.238, R.243 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.243, A:R.243 Water bridges: A:R.240 GOL.6: 5 residues within 4Å: Chain A: E.162, H.163, A.214, R.215, L.216 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.162, A:L.216 Water bridges: A:E.162, A:G.217 GOL.7: 3 residues within 4Å: Chain A: R.172, E.173, H.176 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.176

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 6 residues within 4Å: Chain A: P.178, W.181, G.217, T.222, S.223, P.224 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.223 EDO.5: 4 residues within 4Å: Chain A: G.67, Q.68, R.209 Ligands: AGS.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.68 Water bridges: A:R.209 EDO.8: 2 residues within 4Å: Chain A: H.138, T.139 1 PLIP interactions: 1 interactions with chain A Water bridges: A:S.137

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Min, X. et al., Structural and Functional Characterization of the JH2 Pseudokinase Domain of JAK Family Tyrosine Kinase 2 (TYK2). J.Biol.Chem. (2015)

Release Date

2015-09-16

Peptides

Non-receptor tyrosine-protein kinase TYK2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Non-receptor tyrosine-protein kinase TYK2

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