SMTL ID : 5c03.2 (1 other biounit)

Crystal Structure of kinase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x AGS: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER(Non-covalent)

AGS.1: 19 residues within 4Å: Chain A: L.66, Q.68, G.69, T.70, T.72, V.74, V.111, K.113, E.159, Y.160, V.161, P.165, N.205, R.209, N.210, L.212, P.231, G.232 Ligands: MG.2 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:T.70, A:T.72, A:E.159, A:V.161, A:N.205, A:R.209, A:N.210, A:N.210 Water bridges: A:K.113, A:K.113, A:T.158, A:T.158, A:S.229, A:S.229, A:P.231 Salt bridges: A:K.113, A:R.209

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 2 residues within 4Å: Chain A: N.210 Ligands: AGS.1 No protein-ligand interaction detected (PLIP)

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 3 residues within 4Å: Chain A: H.53, V.144, H.145 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.145 GOL.7: 5 residues within 4Å: Chain A: E.253, C.254, L.262, S.263, M.266 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.263 Water bridges: A:S.263, A:S.263

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 2 residues within 4Å: Chain A: H.138, T.139 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.138 Water bridges: A:S.137, A:T.139 EDO.5: 4 residues within 4Å: Chain A: T.70, E.242, E.245, R.246 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.245, A:E.245, A:R.246 Water bridges: A:R.209 EDO.6: 5 residues within 4Å: Chain A: E.162, H.163, A.214, R.215, L.216 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.162, A:L.216 Water bridges: A:G.217

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Min, X. et al., Structural and Functional Characterization of the JH2 Pseudokinase Domain of JAK Family Tyrosine Kinase 2 (TYK2). J.Biol.Chem. (2015)

Release Date

2015-09-16

Peptides

Non-receptor tyrosine-protein kinase TYK2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Non-receptor tyrosine-protein kinase TYK2

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