SMTL ID : 5cre.1

Human skeletal calsequestrin, D210G mutant low-calcium complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.32 Å

Oligo State

homo-dimer

Ligands

4 x CA: CALCIUM ION(Non-covalent)

CA.1: 3 residues within 4Å: Chain A: N.17, V.18, D.80 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:V.18, A:D.80, A:D.80 CA.2: 3 residues within 4Å: Chain A: E.199, T.229, T.277 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.199, A:E.199, A:T.229, A:T.277 CA.5: 3 residues within 4Å: Chain B: N.17, V.18, D.80 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:V.18, B:D.80, B:D.80 CA.6: 3 residues within 4Å: Chain B: E.199, T.229, T.277 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:E.199, B:E.199, B:T.229, B:T.277

4 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.3: 6 residues within 4Å: Chain A: L.295 Chain B: P.7, E.8, Y.9, L.60, Q.63 1 PLIP interactions: 1 interactions with chain B Hydrophobic interactions: B:L.60 MPD.4: 7 residues within 4Å: Chain A: L.233, M.238, W.242, I.287, L.295, Y.298, W.299 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:L.233, A:W.242, A:I.287, A:W.299 Hydrogen bonds: A:W.299 MPD.7: 6 residues within 4Å: Chain A: P.7, E.8, Y.9, L.60, Q.63 Chain B: L.295 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:L.60 MPD.8: 7 residues within 4Å: Chain B: L.233, M.238, W.242, I.287, L.295, Y.298, W.299 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:L.233, B:W.242, B:I.287, B:W.299 Hydrogen bonds: B:W.299

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lewis, K.M. et al., Characterization of Two Human Skeletal Calsequestrin Mutants Implicated in Malignant Hyperthermia and Vacuolar Aggregate Myopathy. J.Biol.Chem. (2015)

Release Date

2015-10-07

Peptides

Calsequestrin-1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Calsequestrin-1

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