SMTL ID : 5ctc.2 (1 other biounit)

Humanized yeast ACC carboxyltransferase domain bound to tert-butyl 7-[(7-methyl-1H-indazol-5-yl)carbonyl]-2,7-diazaspiro[3.5]nonane-2-carboxylate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-dimer

Ligands

2 x 57K: tert-butyl 7-[(7-methyl-1H-indazol-5-yl)carbonyl]-2,7-diazaspiro[3.5]nonane-2-carboxylate(Non-covalent)

57K.1: 20 residues within 4Å: Chain A: A.448, V.451, F.453, R.482, G.483, F.484, S.485, G.486, R.524, L.553, E.554, E.556, G.557, E.560 Chain B: T.285, A.289, L.290, K.292, V.293, L.294 8 PLIP interactions: 2 interactions with chain B, 6 interactions with chain A Hydrophobic interactions: B:A.289, B:V.293, A:A.448, A:F.453, A:E.556 Hydrogen bonds: A:G.486, A:E.554, A:E.560 57K.2: 21 residues within 4Å: Chain A: T.285, A.289, L.290, K.292, V.293, L.294 Chain B: A.448, V.451, F.453, R.482, G.483, F.484, S.485, G.486, R.524, L.553, E.554, E.556, G.557, E.560, I.561 11 PLIP interactions: 9 interactions with chain B, 2 interactions with chain A Hydrophobic interactions: B:A.448, B:V.451, B:F.453, B:L.553, B:E.556, A:T.285, A:A.289 Hydrogen bonds: B:G.486, B:E.554, B:E.560, B:E.560

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 4 residues within 4Å: Chain B: R.682, W.686, K.713, L.717 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:W.686 Salt bridges: B:R.682, B:K.713 SO4.4: 6 residues within 4Å: Chain B: E.278, G.279, L.303, G.307, T.308, Q.309 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:G.279, B:T.308, B:Q.309, B:Q.309

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kung, D.W. et al., Discovery of spirocyclic-diamine inhibitors of mammalian acetyl CoA-carboxylase. Bioorg.Med.Chem.Lett. (2015)

Release Date

2015-10-14

Peptides

Acetyl-CoA carboxylase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

Acetyl-CoA carboxylase

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